PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338402.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 358aa MW: 40951.2 Da PI: 7.1086

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.5	1.1e-15	45	104	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_027338402.1 45 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 104 57*****************999955656446***********************98 PP
2	AP2	51.2	3e-16	147	198	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_027338402.1 147 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 198 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAKLQHTQKI NANTNNNLNP TNTVTTKVKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE 60 AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQDTILN FPLSSYQNEL 120 KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA 180 TQEEAATAYD MAAIEYRGLN AVTNFDLSRY IKWLKPNHNN NNITSSNNLI EANPNYNTNF 240 TPNPNHEQGF KFFHPREQES FNNGEDATAT QPRPASATSA LGLLLQSSKF KEMMEMTSTA 300 DLSTPPPESE LPSCTFPDDI QTYFECEDSN KYGEGDDIMF SELNSFVPPM FHCDDFAA

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAKLQHTQKI NANTNNNLNP TNTVTTKVKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE  60
AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQDTILN FPLSSYQNEL  120
KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA  180
TQEEAATAYD MAAIEYRGLN AVTNFDLSRY IKWLKPNHNN NNITSSNNLI EANPNYNTNF  240
TPNPNHEQGF KFFHPREQES FNNGEDATAT QPRPASATSA LGLLLQSSKF KEMMEMTSTA  300
DLSTPPPESE LPSCTFPDDI QTYFECEDSN KYGEGDDIMF SELNSFVPPM FHCDDFAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-95	AP2 family protein