PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027338352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 227aa MW: 25767.5 Da PI: 8.7514 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.4 | 1e-17 | 81 | 135 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Le+ F+ + +++ +++ LA++l+L+ rqV vWFqNrRa+ k XP_027338352.1 81 RKKLKLTKEQSATLENNFKLHTTLNLVQKQALAEQLNLKHRQVEVWFQNRRARTK 135 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 108.1 | 6.5e-35 | 81 | 169 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk++l+keq+++LE++F+ +++L+ +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr + XP_027338352.1 81 RKKLKLTKEQSATLENNFKLHTTLNLVQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCKKLSEENQRLKKELQELR-A 169 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MEDDEACITS LSLGLGLEGY VPKKEKQNIN KPLPCLDLTI ELCPKGEAIE VDQQHHKAEG 60 SILKDPNERS PENNNRYNGS RKKLKLTKEQ SATLENNFKL HTTLNLVQKQ ALAEQLNLKH 120 RQVEVWFQNR RARTKLKQTE VDCEFLKKCC KKLSEENQRL KKELQELRAL KVGPSPLHIQ 180 LSKATTLTLC SSCEGLLKPN EGNKATVSDV VRNNHHKLQS SIELEGI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 130 | 138 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-51 | HD-ZIP family protein |