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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027337619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 252aa MW: 28135 Da PI: 7.9127 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.8 | 2.7e-18 | 81 | 130 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g+ XP_027337619.1 81 YRGVRMRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 130 9****998.**********843...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MRKRINMESD AEYNFATSST TSSTTTTTHT NTSSTSSTSN SVTCTKTPPN EAKKAKNLEE 60 NGKDPKGCKK RQRENSNHHT YRGVRMRNWG KWVSEIREPR KKSRIWLGTY PTAEMAARAH 120 DVAALAIKGH SAYLNFPELA QQLPRPTTTS PKDIQAAAAK AANTTFQMVK YCQVEEAEPR 180 QAEQASSSTL SSMDNTHESS SSPSTLDDDT LFDLPDLFPD QNHALCSNSY SWNVCAVDSG 240 LRLQEPLFWE NY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 4e-53 | ERF family protein |