PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337507.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 235aa    MW: 27125.6 Da    PI: 9.5727
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.93.9e-161050242
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    +i n+s r+ t+ kR++g+ KK  ELS+LC++e++ +i+++
  XP_027337507.1 10 FIANESARKATYKKRKKGLVKKIDELSTLCGIEACAVIYGP 50
                    899************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MTRKKVKLAF IANESARKAT YKKRKKGLVK KIDELSTLCG IEACAVIYGP YDPEPEVWPS  60
SWGVQRVLAK FRTMPELEQS KKMVNQESFL NQRIMKGKEQ MKKQVKDNRE KEMAMLMFQC  120
LSAGMVMLNN MTMIDLNDLT WLIDKNLRDI GRRLETTMNV QEMTPYQPQM ATPTLEVAKN  180
EEMALMDHGH GNAYPIHMQR NWFMNLLNGN NGNETTMPQF GDANIQSGFW PNLLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFIANESARKATYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.14e-62M-type_MADS family protein