PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337359.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 462aa MW: 51914.7 Da PI: 6.711

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.6	2e-12	295	341	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L XP_027337359.1 295 MNHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVAYINEL 341 5899*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEDLIISTSS SSSLPQQNPT SITPALQQKL QFLLQGQPDW WVYAIFWQTT NDDNNNLILS 60 FGEGHFQGTR ETSPKVLSTE RKKIMKPIIN DNDAEWFYVM SLTRTFSITN SSSSSSSLPG 120 KAFTLGSVLW LNGKHELQFY SCERSNEAHA HGIQTLVCIP TQNGVVEMGS YDTIKQNWTL 180 VQHVKSLFQS TPDLVPLDKN NPIQIFDDHS ISFSDIGIIT GIPENKKRKE TQTEPIKITK 240 NDNFPSRFSK LPLGSSYVDS EHSDSDCPTL LPSSTEQREP KKRGRKPVLG RDTPMNHVEA 300 ERQRREKLNH RFYALRAVVP NVSRMDKASL LSDAVAYINE LKAKIEELER ESGKKVKMEM 360 GDGMDNQSTS TVVDQRGPHG FALEIDVKMV GGDAMVRVQS ENVNHPGARL MGALRDLEFQ 420 VHHASMSSVN DLMLQDVVVK LPNGMRSEEA LKSAILMRLD QQ

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEDLIISTSS SSSLPQQNPT SITPALQQKL QFLLQGQPDW WVYAIFWQTT NDDNNNLILS  60
FGEGHFQGTR ETSPKVLSTE RKKIMKPIIN DNDAEWFYVM SLTRTFSITN SSSSSSSLPG  120
KAFTLGSVLW LNGKHELQFY SCERSNEAHA HGIQTLVCIP TQNGVVEMGS YDTIKQNWTL  180
VQHVKSLFQS TPDLVPLDKN NPIQIFDDHS ISFSDIGIIT GIPENKKRKE TQTEPIKITK  240
NDNFPSRFSK LPLGSSYVDS EHSDSDCPTL LPSSTEQREP KKRGRKPVLG RDTPMNHVEA  300
ERQRREKLNH RFYALRAVVP NVSRMDKASL LSDAVAYINE LKAKIEELER ESGKKVKMEM  360
GDGMDNQSTS TVVDQRGPHG FALEIDVKMV GGDAMVRVQS ENVNHPGARL MGALRDLEFQ  420
VHHASMSSVN DLMLQDVVVK LPNGMRSEEA LKSAILMRLD QQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	7e-69	bHLH family protein