PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027337316.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 298aa MW: 33694.1 Da PI: 5.4623 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.8 | 1.2e-40 | 17 | 116 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++ +f n+hklFG+sn++k++k l+++++++am++++y++++ra+dPv G+++ i++lq q+e +ael+ XP_027337316.1 17 ACAACKHQRRKCAPDCILAPYFPHDRQPQFLNAHKLFGVSNIVKIIKFLDPHDKDQAMRTIIYQSDMRANDPVGGCYRYIQDLQAQIEYYRAELE 111 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_027337316.1 112 LVLQQ 116 98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MNNNNNTTRN GNSTTQACAA CKHQRRKCAP DCILAPYFPH DRQPQFLNAH KLFGVSNIVK 60 IIKFLDPHDK DQAMRTIIYQ SDMRANDPVG GCYRYIQDLQ AQIEYYRAEL ELVLQQLAIF 120 RAQAHHQQQH GMYAPTTNNV NVSVNGDGEV INGDPLSLYN QPPVVSSKPH YQYLPQQEQY 180 VMMHEIDNSS QNSNANLLQE HINTWAMQNS MSLSSLSLQG QSSNVSDEYD HKPVLDLHSD 240 ERSELGFDSE ELVHRSDEAV LFKIDDAVIK AEADCIQQAQ DHDLKGAATL FTLTNXTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 4e-56 | LBD family protein |