PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336846.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

FAR1

Protein Properties

Length: 511aa MW: 59428.6 Da PI: 8.5936

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.2	8.4e-21	24	110	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+++eY++ +GF vrk++ +++k +g i + ++vC keg+r+++k++ ++raetrt+C ++++ + +++k++v+++++eHnH+l+ XP_027336846.1 24 KYWCEYGRITGFGVRKQYWNRRKVDGVISSCRYVCCKEGHRKDDKRT---VMKPRAETRTDCLVRITLFLGSNNKYVVHEFVEEHNHPLQ 110 689**************************************9998...899*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MECMDVAWKP RVGLQFDTLE AAWKYWCEYG RITGFGVRKQ YWNRRKVDGV ISSCRYVCCK 60 EGHRKDDKRT VMKPRAETRT DCLVRITLFL GSNNKYVVHE FVEEHNHPLQ VPETTHMLAS 120 HRNITEVQAH QIDLAESSGL QQKSSFQLMS TLAGHRTNVG YTPLDAKNYL KAKRQRGMLY 180 GEVGCLMECF QRQLIENPSF FHAYQMDAEE QITNVFWADA KMVIDYRCFG EVISLDTTYC 240 TNQTNRPLTL FSGFNHYQGV VIFRAALLYD ETAESFKWLF ETFLEAHNQK QPQTIFTDQD 300 QAMAKEKWAS CYLKDVFTLG MRSTQLSESL NSDFKACMKP GVGIKQFFAH FERVVEDKRY 360 NELKHEYDFR YKLPMLRYEV EGDPKLSTIR RYRHLAGKMI RLACDVSTSE EYCQLVDDNI 420 NNLISKITKL RLQTNSLTDK YKDDAQMSAN NNGTQPRGFK LRPSTKRKGN KRFKSWVELQ 480 ANRKKSITPI LDQSTSQGPL HDINDSGLDD I

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MECMDVAWKP RVGLQFDTLE AAWKYWCEYG RITGFGVRKQ YWNRRKVDGV ISSCRYVCCK  60
EGHRKDDKRT VMKPRAETRT DCLVRITLFL GSNNKYVVHE FVEEHNHPLQ VPETTHMLAS  120
HRNITEVQAH QIDLAESSGL QQKSSFQLMS TLAGHRTNVG YTPLDAKNYL KAKRQRGMLY  180
GEVGCLMECF QRQLIENPSF FHAYQMDAEE QITNVFWADA KMVIDYRCFG EVISLDTTYC  240
TNQTNRPLTL FSGFNHYQGV VIFRAALLYD ETAESFKWLF ETFLEAHNQK QPQTIFTDQD  300
QAMAKEKWAS CYLKDVFTLG MRSTQLSESL NSDFKACMKP GVGIKQFFAH FERVVEDKRY  360
NELKHEYDFR YKLPMLRYEV EGDPKLSTIR RYRHLAGKMI RLACDVSTSE EYCQLVDDNI  420
NNLISKITKL RLQTNSLTDK YKDDAQMSAN NNGTQPRGFK LRPSTKRKGN KRFKSWVELQ  480
ANRKKSITPI LDQSTSQGPL HDINDSGLDD I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	KAKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-56	FAR1 family protein