PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027336806.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 340aa MW: 38140.3 Da PI: 5.2578 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.1 | 0.00014 | 204 | 226 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H XP_027336806.1 204 YKCETCDKVFRSYQALGGHRASH 226 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MEKHKCKLCF RNFSNGRALG GHMRSHMMNL PIPPKPNEFA TVQLSFETES SPSSSSFEQD 60 KSLSYGLREN PKRSFRIADP EFSFPADAAS ASVILQDRES ETESSKKPTR KRSQRPRKLG 120 DTTKTMNIAK QNESASSVSD TTTEEDVAFC LMMLSRDKWS ENNHYEEQEE EEEEEEEQEE 180 KEEDSDESEE LKSWKKPNKV RGRYKCETCD KVFRSYQALG GHRASHKKIK VVEAEVEMKD 240 GKNGEDFAAV VVEKKIHECP VCLRVFGSGQ ALGGHKRTHV IGSATVTATP IATTTNSVRT 300 STKFGDSLID LNLPAPADDD DDVSQFDVSA VSDAEFVKLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60580.1 | 3e-66 | C2H2 family protein |