PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336519.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 391aa MW: 44829.1 Da PI: 8.7069

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	128	151	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C Cg+ F +++ L++H + H XP_027336519.1 128 YLCRVCGRKFYTNEKLVNHFKQlH 151 56*****************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MVSILKFRSI FFITLESTSG LTYGASRHCH FASEDWGKTP KLIPNEKPNR VGLFWDLDNK 60 PPNSIPPYEV ANKLRVAASS FGVVRYTVAY ANSHTFSHVP QVVRERRKER QLLNRLENKG 120 VIKPNEPYLC RVCGRKFYTN EKLVNHFKQL HEREHVKRMN QIESARGSRR VKLVAKYSMK 180 MEKYKKAASA VLTPKVGYGL ADELKRAGFW VQTVLDKPQA ADLALKSHMV DIMDHRRVEC 240 VVLVSDDSDF VDVIKEARLR CLKTVVIGDT DDGVLKRTAD TAFSWEEILM GKAKKEAVSV 300 VKNWKDRDIL KRLEWSYNPD VDKKKLNLED TIAESFEDVN MDDICGEADD TYNDDKGSWW 360 ELDSDDDVPN GHSSKLSHVL GYPIQQQTIY S

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MVSILKFRSI FFITLESTSG LTYGASRHCH FASEDWGKTP KLIPNEKPNR VGLFWDLDNK  60
PPNSIPPYEV ANKLRVAASS FGVVRYTVAY ANSHTFSHVP QVVRERRKER QLLNRLENKG  120
VIKPNEPYLC RVCGRKFYTN EKLVNHFKQL HEREHVKRMN QIESARGSRR VKLVAKYSMK  180
MEKYKKAASA VLTPKVGYGL ADELKRAGFW VQTVLDKPQA ADLALKSHMV DIMDHRRVEC  240
VVLVSDDSDF VDVIKEARLR CLKTVVIGDT DDGVLKRTAD TAFSWEEILM GKAKKEAVSV  300
VKNWKDRDIL KRLEWSYNPD VDKKKLNLED TIAESFEDVN MDDICGEADD TYNDDKGSWW  360
ELDSDDDVPN GHSSKLSHVL GYPIQQQTIY S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	326	KRLEWSYNPDVDKKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-135	C2H2 family protein