PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336502.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 305aa MW: 33621.5 Da PI: 8.153

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00089	5	27	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C++sF + L H++ H XP_027336502.1 5 HKCKLCSRSFANGRALGGHMKAH 27 79******************998 PP
2	zf-C2H2	15.8	4e-05	205	226	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++CgksF+++ L +H + + XP_027336502.1 205 RCHNCGKSFRSSRALGTHTSIC 226 8**************9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MMERHKCKLC SRSFANGRAL GGHMKAHLAT LPLPLKPQTF TDSASATSLS YSSSSSSSES 60 EQEEDEEQVV ANRESEEKSL IYGLRENPKK SFKLADPEFS SFAPDTASVV QDRESETESK 120 NPTGQRSKRN RKSNVACFMV STTPPPTDPE PLSSVSDTSP EEDVAMCLMM LSRDKWKRNN 180 NVVEQRPNGS FNKEIKFKRV RGNLRCHNCG KSFRSSRALG THTSICFEAG PKAEGNNTTT 240 TTNSKSKVFE CPFCYKVFGS GQALGGHKRS HLIPSSSTAK YKESFIDLNL PAPVEEDDLS 300 VLSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02030.1	1e-37	C2H2 family protein