PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336315.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SRS

Protein Properties

Length: 355aa MW: 39598.7 Da PI: 7.4085

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336315.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	29.1	2.9e-09	31	71	4	43
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstW 43 ++ +C++CGn a+ C +e C+ CC + C+ hv k+t XP_027336315.1 31 NKPKCKQCGNVARSRCPYESCKSCCSRNQNPCHIHVlKATS 71 5679*******************************955554 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MAAPNNNTTA KPGTLGVGVA ATPPKSQRGH NKPKCKQCGN VARSRCPYES CKSCCSRNQN 60 PCHIHVLKAT STFPDKTPSS GAAPLDQQSL EQPQSTAGRV ASLRQLSNSF AQFNSLHLSL 120 RSKKPLTRKD AEAINEWRFS KLKEYKERNI EVENEAFDRY MLNVDLLEEV LSVKSLDDNV 180 SSALESNPTP ESSEVMIPGL KLQLRSNTMR SDGLRMRIQQ IVDEGLKKLQ KRAVDGDINE 240 SIDDEAKKAS KRGKRVERLS AISDLMDKIN KARTEEDLKS CLEMKVQLFN SEEGSALIDL 300 KDNEILKNQT AETDEVQAKE LDYSLPKLIG TTEIDQETLN TVDKHFSSLE HVEKL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MAAPNNNTTA KPGTLGVGVA ATPPKSQRGH NKPKCKQCGN VARSRCPYES CKSCCSRNQN  60
PCHIHVLKAT STFPDKTPSS GAAPLDQQSL EQPQSTAGRV ASLRQLSNSF AQFNSLHLSL  120
RSKKPLTRKD AEAINEWRFS KLKEYKERNI EVENEAFDRY MLNVDLLEEV LSVKSLDDNV  180
SSALESNPTP ESSEVMIPGL KLQLRSNTMR SDGLRMRIQQ IVDEGLKKLQ KRAVDGDINE  240
SIDDEAKKAS KRGKRVERLS AISDLMDKIN KARTEEDLKS CLEMKVQLFN SEEGSALIDL  300
KDNEILKNQT AETDEVQAKE LDYSLPKLIG TTEIDQETLN TVDKHFSSLE HVEKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	232	LKKLQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	1e-97	SRS family protein