PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335760.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 528aa MW: 59323.5 Da PI: 5.0332

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.7e-11	477	526	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 + +WT E+e l +vk++G g+W++I + ++R++ ++k++w++ XP_027335760.1 477 KRKWTSLEEETLRAGVKMFGEGNWASIRNFYSnifENRSGVDLKDKWRNM 526 579*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MKPEKMDPDI SRWVLEFLLR SSVPDSLIQK SLTVLPLSAA DSRLKKTLLL RTLQSLLLKA 60 SLSETTLQIF ELLEDLNRND SVPVTDSMRR AYCAVAVECT VKYLAASSDD PAGEYFDAVR 120 RIWRGRVAGM GVEGRRSELV SGELSQWGED IEAALWDPRV CERLASLNSR REALKEVRGF 180 LEEAWEMMGP SFLDSVGALS KGKGLCPEGV CEIALSVEAL RKREGELEGS RKEKKESFGG 240 GGGDRSDDSD DDDDDDNNDN DDHDRDGGGG GASDDGACME GVAVQDENQG KEPLEERVVL 300 PAQRYKAVQK GNPQLKRKHS ALRTCNRGVK ISDPEEVEPA NMWSHYKYDP VSTAEVRRVR 360 ESLKSSSFEL RSLVKDPLPD ALHMSEVVRS KLATEDTNFE PLVENQSEDV YVPNPDVCKS 420 IVPFQPKNDT NLGKKSSVRS SNACHPNLME RRSNARTFEW DDSMDNLPQG KQPRRRKRKW 480 TSLEEETLRA GVKMFGEGNW ASIRNFYSNI FENRSGVDLK DKWRNMIR

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MKPEKMDPDI SRWVLEFLLR SSVPDSLIQK SLTVLPLSAA DSRLKKTLLL RTLQSLLLKA  60
SLSETTLQIF ELLEDLNRND SVPVTDSMRR AYCAVAVECT VKYLAASSDD PAGEYFDAVR  120
RIWRGRVAGM GVEGRRSELV SGELSQWGED IEAALWDPRV CERLASLNSR REALKEVRGF  180
LEEAWEMMGP SFLDSVGALS KGKGLCPEGV CEIALSVEAL RKREGELEGS RKEKKESFGG  240
GGGDRSDDSD DDDDDDNNDN DDHDRDGGGG GASDDGACME GVAVQDENQG KEPLEERVVL  300
PAQRYKAVQK GNPQLKRKHS ALRTCNRGVK ISDPEEVEPA NMWSHYKYDP VSTAEVRRVR  360
ESLKSSSFEL RSLVKDPLPD ALHMSEVVRS KLATEDTNFE PLVENQSEDV YVPNPDVCKS  420
IVPFQPKNDT NLGKKSSVRS SNACHPNLME RRSNARTFEW DDSMDNLPQG KQPRRRKRKW  480
TSLEEETLRA GVKMFGEGNW ASIRNFYSNI FENRSGVDLK DKWRNMIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	471	477	KQPRRRK
2	473	477	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-15	MYB_related family protein