PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335673.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 293aa MW: 32797.8 Da PI: 7.7594

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	134	188	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+lgL rqV vWFqNrRa+ k XP_027335673.1 134 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 188 788899***********************************************98 PP
2	HD-ZIP_I/II	129.8	1.1e-41	134	223	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l XP_027335673.1 134 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELR-AL 223 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MMVGKEDLGL SLSLNFPQNT QNPQQLNLMS SSTHSSSPSA CNPHKASWND PFTSSDRNSD 60 TCRGEARSFL RGIDVNRLPS AVDCEEEAGV SSPNSTVSSV SGKRSERDAN GEEHDMDRAC 120 SRGISDEEDG ETSRKKLRLS KDQSAILEES FKEHNTLNPK QKLALAKQLG LRPRQVEVWF 180 QNRRARTKLK QTEVDCEVLK RCCENLTEEN RRLQKEVQEL RALKLSPQFY MQMTPPTTLT 240 MCPSCERVAV PSSAVDAATR HHPMAQAHPR PIPIGPWAST APIPHRPFDA FHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	139	SRKKLRL
2	183	191	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-100	HD-ZIP family protein