PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335640.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 577aa MW: 63049.1 Da PI: 6.2509

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.9e-09	379	426	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_027335640.1 379 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 426 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MENQFFLNAG VSQHPLHFEP SPTPPPQTLP LSSMSTWQPL SSSSMEIHPT VLNCSSEQTQ 60 DCFYNWDRST DHTLHFDSSA LSSMVSSPAA SSNPNNNNIC NESFMIRELV GKLGTIGGTS 120 DEISQHSHNP LVVASSYMNN ANNTTPLSSP PKLNIVNSLV KENLTNLGAK SMALNSTVAE 180 FSADPGFAER AAKFSCFGSR SFNDRSTQLV VNNAELAPRS AQVVEQGKLP RVSSSPLLKT 240 LGSQMGAQEN KSSQFQEMDR MEVANSQEES TISEQIPNGE IGVKTSPDMS SRKRKASSKG 300 KAKETLNSTS PTKGVEGSED SNAKRSKTNE GEGNENGPVK AEEESKAGEE KQNKSNSKPP 360 EPPKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN 420 YVQSLQRQVE FLSMKLASVN TRMDFSIENL VSKDVFQSNN SLATHQNPIF PLDSSAPAFY 480 GQQTQQNPVI HNNIPNRTVT HCSVDPLDTS LCQNLGMQLP PLNGFNEGGS QYALTFCEDD 540 LNTIVQMGFG QTANRKTPIQ SSSFNGSNQV PQMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MENQFFLNAG VSQHPLHFEP SPTPPPQTLP LSSMSTWQPL SSSSMEIHPT VLNCSSEQTQ  60
DCFYNWDRST DHTLHFDSSA LSSMVSSPAA SSNPNNNNIC NESFMIRELV GKLGTIGGTS  120
DEISQHSHNP LVVASSYMNN ANNTTPLSSP PKLNIVNSLV KENLTNLGAK SMALNSTVAE  180
FSADPGFAER AAKFSCFGSR SFNDRSTQLV VNNAELAPRS AQVVEQGKLP RVSSSPLLKT  240
LGSQMGAQEN KSSQFQEMDR MEVANSQEES TISEQIPNGE IGVKTSPDMS SRKRKASSKG  300
KAKETLNSTS PTKGVEGSED SNAKRSKTNE GEGNENGPVK AEEESKAGEE KQNKSNSKPP  360
EPPKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN  420
YVQSLQRQVE FLSMKLASVN TRMDFSIENL VSKDVFQSNN SLATHQNPIF PLDSSAPAFY  480
GQQTQQNPVI HNNIPNRTVT HCSVDPLDTS LCQNLGMQLP PLNGFNEGGS QYALTFCEDD  540
LNTIVQMGFG QTANRKTPIQ SSSFNGSNQV PQMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-104	bHLH family protein