PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335453.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 387aa MW: 43696.7 Da PI: 5.954

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.8e-13	185	236	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_027335453.1 185 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 236 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MESLQGPLNS CFFGEHLEEN CLEQVLVDAG SLRLEEEEQL LISSLEDNIN MPFLQMLQSV 60 ESPQIFPLKE PNFQTLLRLQ HLKKPWEGIA YIPRMETQFQ AALELESCVT HDMLEMQSPV 120 KSESNELQHL LSVSCGEKVS YECNQEPPHK VSQPCLKSQP VTTTREKRKR KRTRPSKNKE 180 DVENQRMTHI AVERNRRRQM NDHLSVLRSL MPPSYIQRGD QASIIGGAID FVKELEQLLQ 240 SLEAQKRMRK NEEGGASSMR LCNPSSSSSP SPPHGYGMRS SSSSNDEVNC GDEVKAENKS 300 EAADIKVTLI QTHVNLKIEC QRKPGQLIKV IVALEDLRLT ILHLNITSSE ASVLYSLNLK 360 IEEDCKLGSA NEIAEAVHHI FNLMNGS

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MESLQGPLNS CFFGEHLEEN CLEQVLVDAG SLRLEEEEQL LISSLEDNIN MPFLQMLQSV  60
ESPQIFPLKE PNFQTLLRLQ HLKKPWEGIA YIPRMETQFQ AALELESCVT HDMLEMQSPV  120
KSESNELQHL LSVSCGEKVS YECNQEPPHK VSQPCLKSQP VTTTREKRKR KRTRPSKNKE  180
DVENQRMTHI AVERNRRRQM NDHLSVLRSL MPPSYIQRGD QASIIGGAID FVKELEQLLQ  240
SLEAQKRMRK NEEGGASSMR LCNPSSSSSP SPPHGYGMRS SSSSNDEVNC GDEVKAENKS  300
EAADIKVTLI QTHVNLKIEC QRKPGQLIKV IVALEDLRLT ILHLNITSSE ASVLYSLNLK  360
IEEDCKLGSA NEIAEAVHHI FNLMNGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	197	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	2e-68	bHLH family protein