PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335307.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 440aa MW: 48264.5 Da PI: 7.4828

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.6	2.6e-41	161	238	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC +ls+ak+yhr+h+vCe hsk+p v++sgl +rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+ XP_027335307.1 161 ICQVEGCGLNLSSAKDYHRKHRVCESHSKSPRVVISGLDRRFCQQCSRFHALSEFDDKKRSCRRRLSDHNARRRKPQP 238 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEWNAKSLGQ WDWEHFFLNT KATDGEADGE INVGALYPSG GSACSGSELI HASSSRSSKS 60 ASNNSSSNGD SKISSILTLE GSQDDSSGKK ELCKGEAIET SPAAEPSSVS GEPLLTLKLG 120 KRFYFEDVCT ASDSKKASSF EVPISSGKKC RANNQNLQHP ICQVEGCGLN LSSAKDYHRK 180 HRVCESHSKS PRVVISGLDR RFCQQCSRFH ALSEFDDKKR SCRRRLSDHN ARRRKPQPEA 240 VQLNPSVLSS SPYAIDGRQI MSPFAFSRSA TNLAWQDIHC SKLPQTKDFL PKPAKAFNKI 300 PNIVAMLSDD SSGLLTSKDI ATKSIVPGIE DQITSADSNA TQDVNRALSL LSTNSWGAYE 360 TKSLSLQHST TRTNATAHSI TNEMTQRLPL PSSEYWHTDQ PPPHSSMCIS FSDFDSTNRF 420 QDFQLFTAPY ESGFPCNQVD

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEWNAKSLGQ WDWEHFFLNT KATDGEADGE INVGALYPSG GSACSGSELI HASSSRSSKS  60
ASNNSSSNGD SKISSILTLE GSQDDSSGKK ELCKGEAIET SPAAEPSSVS GEPLLTLKLG  120
KRFYFEDVCT ASDSKKASSF EVPISSGKKC RANNQNLQHP ICQVEGCGLN LSSAKDYHRK  180
HRVCESHSKS PRVVISGLDR RFCQQCSRFH ALSEFDDKKR SCRRRLSDHN ARRRKPQPEA  240
VQLNPSVLSS SPYAIDGRQI MSPFAFSRSA TNLAWQDIHC SKLPQTKDFL PKPAKAFNKI  300
PNIVAMLSDD SSGLLTSKDI ATKSIVPGIE DQITSADSNA TQDVNRALSL LSTNSWGAYE  360
TKSLSLQHST TRTNATAHSI TNEMTQRLPL PSSEYWHTDQ PPPHSSMCIS FSDFDSTNRF  420
QDFQLFTAPY ESGFPCNQVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	235	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-61	SBP family protein