PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027335245.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 248aa MW: 28980.4 Da PI: 8.6157 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.9 | 1.2e-17 | 180 | 213 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cg+t+Tp+WR gp g +tLCnaCG++y++ + XP_027335245.1 180 CNHCGSTETPQWRPGPTGRSTLCNACGMRYKSGK 213 *******************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MALHNDIFAV RYDEKEMKGL NVDTNFSSSF DPQRRYEWHN FWDDVESILP TTNITWLDTS 60 KVEEARWEQT EEQENVKKPF SDLSNIQSKA LLTVADQKQS ETRLDNSKTE KEERLKKQSS 120 IQSIQEEALS TFSKKPAAAD EMHSLRTEEV TPVEKKEPEM ALDDRSDRSW AIFVRKKKRC 180 NHCGSTETPQ WRPGPTGRST LCNACGMRYK SGKLLPEYRP RSSPAFDGRK HSNFHKRIMR 240 MRRFSTPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 3e-28 | GATA family protein |