PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335201.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 378aa MW: 43219.6 Da PI: 5.8997

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	88.9	5.8e-28	67	149	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k++++++ s +++y+++++ XP_027335201.1 67 WVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKQQDRGG--SGSAKMSYYKEID 149 ******************************************************************98..34558***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MYLSEKPRPI DFYKEEGARD MIIEVVSSGE LPPPPPHHQQ PPMILGESSG EDPEVEIKAP 60 KKRAETWVQD ETRSLIGLRR EMDSLFNTSK SNKHLWEQIS AKMREKGFDR SPTMCTDKWR 120 NLLKEFKKAK QQDRGGSGSA KMSYYKEIDE ILRERSKSVQ YKSPTPPPKV DSFMQFADKG 180 IDDTSISFGP VEASGRPTLN LERSLDHDGH PLAITTADAV AASGVPPWNW RETPGNGGES 240 QSCCGRVISV KWGDYTRRIG IDGTPEAIKE AIRAAFRLRT KRAFWLEDED QIIRSIDRDM 300 PIGNYTLHLD EGMAIKVCLY DESDHIPVHT EEKIFYTEDD YRDFLARRGW TCLREFDGYR 360 NIDNMDDLRH GAIYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MYLSEKPRPI DFYKEEGARD MIIEVVSSGE LPPPPPHHQQ PPMILGESSG EDPEVEIKAP  60
KKRAETWVQD ETRSLIGLRR EMDSLFNTSK SNKHLWEQIS AKMREKGFDR SPTMCTDKWR  120
NLLKEFKKAK QQDRGGSGSA KMSYYKEIDE ILRERSKSVQ YKSPTPPPKV DSFMQFADKG  180
IDDTSISFGP VEASGRPTLN LERSLDHDGH PLAITTADAV AASGVPPWNW RETPGNGGES  240
QSCCGRVISV KWGDYTRRIG IDGTPEAIKE AIRAAFRLRT KRAFWLEDED QIIRSIDRDM  300
PIGNYTLHLD EGMAIKVCLY DESDHIPVHT EEKIFYTEDD YRDFLARRGW TCLREFDGYR  360
NIDNMDDLRH GAIYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein