PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335047.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 842aa    MW: 93347.9 Da    PI: 6.4179
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.74.7e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027335047.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027335047.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp118.94.1e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k+ ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_027335047.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 842 aa     Download sequence    
MKLSTSGLGQ QGHEGEKKCL NSELWHACAG PLVSLPNAGT RVVYFPQGHS EQVAATTNRE  60
IDGHIPNYPS LPPQLICQLH NVTMHADIET DEVYAQMTLQ PLTPQEQKDT FLPMELGIPS  120
KQPSNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSIFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYIKAVYHT RISVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDSVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP LRLKRPWHPG SSSLNDGRDE ANGLMWLRGG PVDQGLNSIN FQGAGMLPWM  420
QQRLDPTLLG GNDPNQQYQA MLAAGLQNLG SGYHMKQQMM SFQQPFPYLQ QSGNNNSPLQ  480
LQQQQAIQQS GSSNILQPHA QIMGENLSQH LLQKPHNNQE VQTQQQQHTY QETLLIPSDQ  540
LHQRQHSSIP SPSYSKPDFL DSSIKFPTSV SPGQNVLSSL CPEGSGSLLN LSRSSQSLLT  600
EQLPQQSWTP KYAPLQVNAF GSTVPHAQYS GKDSAMVLPH CNSDAQNPTL FGVNIDSSGL  660
LLPTTVPGYT TSSADTDSST MPLAESGFQG SLYACMQDSS ELLRSAGHVD PHNQTQTFVK  720
VYKSGSVGRS LDISRFSSYH ELREELAQMF GIEGKLEDPL RSGWQLVFVD RENDVLLLGD  780
DPWESFVNNV WYIKILSPED IQKMGEQAVE SLALGSGQRL NGTGAESQDI VSGPPSIGSL  840
EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein