PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335042.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 639aa MW: 70824.5 Da PI: 6.5954

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.3	1.8e-08	533	581	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v q G+g+W+ I r Rt ++k++w+++l XP_027335042.1 533 AWTLVEVMKLVEGVSQCGPGRWSEIKRLSFsshSYRTSVDLKDKWRNLL 581 7*************************99999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
METVVGIEDN DDGKLEDSGV DRSSSAVSSP KQIANPVVYK LVRVEGDGRL VPATDDEVME 60 VEDFLEYENS EMRVVADTGQ SLECISIERS SSGKLRLECS EGTAEADLGK LNAKFQMLQK 120 VKEEEKLRLS CGSPVHSHVN IDSQCSADKF PIMDGKAQSE TPYQEIPSIA SSLNYSHSNQ 180 SGSIDQCSRP SEGVIESGSS ASAVYYNLKP DFSMVDGEIC LDKLSIRELH ELFKVTFGRQ 240 TTVKDKQWLK RRIAMSLTNS CDVSATTFIV KDNKIVRKCE EDSSKNMNAA SLISSENMAE 300 EEDVNFNDSS AVKGCGIEDN LVVSETRLRN HNTEHGLGHE NHQIEERAAK RIRKPTKRYI 360 EELSEHEFRE HSPRSLISNK NMGLGHVSPT SYVRPSRNAF SDGRTFITRL DSLGGSDVLI 420 PCASRDQRSR PRKNITSLMK FHPTGMGEAA KLGNKLLGEH GFDAGSEIQD KVLKSRMPAK 480 FHQPSACEPA KETIELWQEL RPEKADPSSH TSDDNIVTVP TAKGGMRRKH HRAWTLVEVM 540 KLVEGVSQCG PGRWSEIKRL SFSSHSYRTS VDLKDKWRNL LKASFADDGI NARKHGTVMI 600 PETILVRVRE LAEMNSQVPP SKLTGGAGNV HGGDRSGYL

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

METVVGIEDN DDGKLEDSGV DRSSSAVSSP KQIANPVVYK LVRVEGDGRL VPATDDEVME  60
VEDFLEYENS EMRVVADTGQ SLECISIERS SSGKLRLECS EGTAEADLGK LNAKFQMLQK  120
VKEEEKLRLS CGSPVHSHVN IDSQCSADKF PIMDGKAQSE TPYQEIPSIA SSLNYSHSNQ  180
SGSIDQCSRP SEGVIESGSS ASAVYYNLKP DFSMVDGEIC LDKLSIRELH ELFKVTFGRQ  240
TTVKDKQWLK RRIAMSLTNS CDVSATTFIV KDNKIVRKCE EDSSKNMNAA SLISSENMAE  300
EEDVNFNDSS AVKGCGIEDN LVVSETRLRN HNTEHGLGHE NHQIEERAAK RIRKPTKRYI  360
EELSEHEFRE HSPRSLISNK NMGLGHVSPT SYVRPSRNAF SDGRTFITRL DSLGGSDVLI  420
PCASRDQRSR PRKNITSLMK FHPTGMGEAA KLGNKLLGEH GFDAGSEIQD KVLKSRMPAK  480
FHQPSACEPA KETIELWQEL RPEKADPSSH TSDDNIVTVP TAKGGMRRKH HRAWTLVEVM  540
KLVEGVSQCG PGRWSEIKRL SFSSHSYRTS VDLKDKWRNL LKASFADDGI NARKHGTVMI  600
PETILVRVRE LAEMNSQVPP SKLTGGAGNV HGGDRSGYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-122	MYB_related family protein