PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335018.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 381aa MW: 41506.1 Da PI: 8.3474

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.8	5.4e-15	220	266	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h++ ErrRRd+iN+++ +L++l+P + K +Ka++L ++++Y+k+Lq XP_027335018.1 220 VHKQSERRRRDKINQRLKTLQKLVPYS-----SKTDKASMLDEVIQYLKQLQ 266 69**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSQCVPSCDA DDNIPIATKL PLLPNSNTIA FQVPMFDYTC RKGQLSKLLN EDSTGNFNTW 60 DKSIANDTLA STVQCVGENK HESQLISWPN PRQIAITVDA LVPCSSEQGM PQVVESGTLG 120 ACVGRSSETV RRELSGCGDW SASGSATCCK DVTVGFNSAS MGSPENTTGS AKHCTGTTTN 180 DDHDSIRHRG SQSEAGDGDY KATRIDRSLG SNKRSKAQAV HKQSERRRRD KINQRLKTLQ 240 KLVPYSSKTD KASMLDEVIQ YLKQLQAQVQ TMNWMKMYSS MMLPITMQQQ LQMSMMARMG 300 IGMGKNMGMG MGIGMGMDMN IPSFSPVFHP SPFMPMASWS ACGGDQFPGA QSKPVTVDAF 360 SRMAALYQQL YHPPSASTSK S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSQCVPSCDA DDNIPIATKL PLLPNSNTIA FQVPMFDYTC RKGQLSKLLN EDSTGNFNTW  60
DKSIANDTLA STVQCVGENK HESQLISWPN PRQIAITVDA LVPCSSEQGM PQVVESGTLG  120
ACVGRSSETV RRELSGCGDW SASGSATCCK DVTVGFNSAS MGSPENTTGS AKHCTGTTTN  180
DDHDSIRHRG SQSEAGDGDY KATRIDRSLG SNKRSKAQAV HKQSERRRRD KINQRLKTLQ  240
KLVPYSSKTD KASMLDEVIQ YLKQLQAQVQ TMNWMKMYSS MMLPITMQQQ LQMSMMARMG  300
IGMGKNMGMG MGIGMGMDMN IPSFSPVFHP SPFMPMASWS ACGGDQFPGA QSKPVTVDAF  360
SRMAALYQQL YHPPSASTSK S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	230	ERRRRD
2	226	231	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	8e-48	bHLH family protein