PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334972.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 326aa MW: 36033.8 Da PI: 8.6806

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.7	1.3e-41	187	264	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ XP_027334972.1 187 RCQAEGCNADLSQAKHYHRRHKVCEYHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ 264 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MLEYEWGNPS TIMLTGNEDG AAAAADQTHR QIFDHYASHT LLPDHFLHGP THTTAHTNTV 60 DFTNHHFNPQ PHQHLHHHHH PFFDPRAFHG ASSTSYPPPQ PPPPSVLSLD PLPHVNAATC 120 GPGPGPGLLL VPKSEEVGRP MDFVGSRIGL NLGGRTYFSS SEDDFVSRLY RRSRPAEPGS 180 TASNSPRCQA EGCNADLSQA KHYHRRHKVC EYHSKAATVI AAGLTQRFCQ QCSRFHLLSE 240 FDNGKRSCRK RLADHNRRRR KTQQPTQEIP KSQPSLDNVA RSPPDSGAQS SSSVTVAVSP 300 PDYFRQRPYQ STSPSTTSSS LFFSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	9e-72	SBP family protein