PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027334749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28137.5 Da PI: 8.1775 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 141 | 191 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg+f tae+Aa a+++a+ +++g XP_027334749.1 141 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 191 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MYGQSTYESD LALLDSIRRH LLGESESIFG APTSVSGNAR VYSRSSSFSS LYSCLSDNWG 60 ELPLKEDDSE DMVLYGVLRD AVNVGWVPSL DARSPESISS DFPAEIAVKS EPDVMPPANS 120 PPAVVPVILP EKKVSPAKGK HYRGVRQRPW GKFAAEIRDP AKNGARVWLG TFETAEDAAL 180 AYDRAAYRMR GSRALLNFPL RVNSGEPDPV RVTSKRSSPE RSSSSESGSS AKRKKVGVTG 240 QGQVGSQVAE CTRGEQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G17500.1 | 5e-59 | ERF family protein |