PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334497.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GATA

Protein Properties

Length: 542aa MW: 60057.5 Da PI: 6.5638

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.9	4.3e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_027334497.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETVDQEDQ 60 RVSRIKSMPL NKNKEVKLVK RKQNYDDNTA SGLVLDYNQG FRKAMDEDTS NRSSSGSAIS 120 NTESCAQFGG IDASDLTGPA QSVVWDAMVP SKKRTCAGRP KASSVEKLTR DLCTILHEQQ 180 SYFSASSEED LLFESETPMV SVEIGHGSIL IRHPSSIARE EESEASSLSV DNKQCLMSEA 240 YSWSGTIPMY VDHSGINFSS HHGAEKIRNS AGQIMKQEQL KRDNSQIEKL HVPGNHDSPL 300 CLIDLNDVVN YEEFMRNLTN EEQQQLLKYL PVVDNLKLPD SLENMFNSFQ FKENLTYFQQ 360 LLGEGVFDIS LLGAKPEEWK MLKRLVLSNL LKSKWVEHYN FLKKCENKAG KSIDLGPTGM 420 GSSNVANAKR MRGSQNQNFP ELKTTMRSPK RVILKAGSQG EDVVEDGCSF SPKSIFSLPR 480 GGSSLHMLDS LNFVDESSDQ DLLLDLPSNS SFPQAELLHP NLGFGAQVST SSSSVHSPVA 540 HP

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETVDQEDQ  60
RVSRIKSMPL NKNKEVKLVK RKQNYDDNTA SGLVLDYNQG FRKAMDEDTS NRSSSGSAIS  120
NTESCAQFGG IDASDLTGPA QSVVWDAMVP SKKRTCAGRP KASSVEKLTR DLCTILHEQQ  180
SYFSASSEED LLFESETPMV SVEIGHGSIL IRHPSSIARE EESEASSLSV DNKQCLMSEA  240
YSWSGTIPMY VDHSGINFSS HHGAEKIRNS AGQIMKQEQL KRDNSQIEKL HVPGNHDSPL  300
CLIDLNDVVN YEEFMRNLTN EEQQQLLKYL PVVDNLKLPD SLENMFNSFQ FKENLTYFQQ  360
LLGEGVFDIS LLGAKPEEWK MLKRLVLSNL LKSKWVEHYN FLKKCENKAG KSIDLGPTGM  420
GSSNVANAKR MRGSQNQNFP ELKTTMRSPK RVILKAGSQG EDVVEDGCSF SPKSIFSLPR  480
GGSSLHMLDS LNFVDESSDQ DLLLDLPSNS SFPQAELLHP NLGFGAQVST SSSSVHSPVA  540
HP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-147	GATA family protein