PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334405.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 585aa MW: 62645.8 Da PI: 6.978

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	194	237	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e XP_027334405.1 194 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 237 79***************************************997 PP
2	QLQ	54.2	4.5e-19	137	169	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q++++Ky++a++PvPp+Ll++ XP_027334405.1 137 PFTSAQWKELERQAMIFKYMMASVPVPPDLLLP 169 8*****************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MGEFGVSHKE DVKKSSSNNN ASGSSVLGLD VKVQDSEALP NKMMMMMVHH NHHHRPLSPF 60 DNDSCAGDGD GPTTYMSFTN HINLVSDASV LGPAIDGGCG AAAAPVRPLQ PFHTSANTSA 120 TSTFKSSGGM AASLGFPFTS AQWKELERQA MIFKYMMASV PVPPDLLLPS SVTTTPRYPC 180 MDGGFNLRLA SSTDPEPGRC RRTDGKKWRC SRDVAPNHKY CERHMHRGRP RSRKPVEVHT 240 NTITNTLSSN NNNNLQIKRP RHDCNPFPTA GVTVAISNPS TRKDASSSHY LAPPTTQPYL 300 ESSLSLHNFG VKAANFGSVA SVSSNEEPRG LDWMLNGDPI SLGASDSEWQ SLMHNKVGMS 360 SESSCHNTHP QYLNSFALYS SGLDQQNRSL PLFLNPLVVP MESFQSEKPR GFIDAWSNTE 420 TGESNANSNN KNCAASIGKL SLSSLDLSMG GGTAVHEDMG TIEMGLGLME PDANAHNDTK 480 ISLSNWLNPT APWVASTSTP GGPLAEVLRP STVTATNETT SNPSSPVITH VESNSPLGTM 540 VSSPSGVLQK TLASLSDSSS NSSPTIASSR ANSEMPLLRF QSNVN

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MGEFGVSHKE DVKKSSSNNN ASGSSVLGLD VKVQDSEALP NKMMMMMVHH NHHHRPLSPF  60
DNDSCAGDGD GPTTYMSFTN HINLVSDASV LGPAIDGGCG AAAAPVRPLQ PFHTSANTSA  120
TSTFKSSGGM AASLGFPFTS AQWKELERQA MIFKYMMASV PVPPDLLLPS SVTTTPRYPC  180
MDGGFNLRLA SSTDPEPGRC RRTDGKKWRC SRDVAPNHKY CERHMHRGRP RSRKPVEVHT  240
NTITNTLSSN NNNNLQIKRP RHDCNPFPTA GVTVAISNPS TRKDASSSHY LAPPTTQPYL  300
ESSLSLHNFG VKAANFGSVA SVSSNEEPRG LDWMLNGDPI SLGASDSEWQ SLMHNKVGMS  360
SESSCHNTHP QYLNSFALYS SGLDQQNRSL PLFLNPLVVP MESFQSEKPR GFIDAWSNTE  420
TGESNANSNN KNCAASIGKL SLSSLDLSMG GGTAVHEDMG TIEMGLGLME PDANAHNDTK  480
ISLSNWLNPT APWVASTSTP GGPLAEVLRP STVTATNETT SNPSSPVITH VESNSPLGTM  540
VSSPSGVLQK TLASLSDSSS NSSPTIASSR ANSEMPLLRF QSNVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	5e-30	GRF family protein