PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334397.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRF

Protein Properties

Length: 586aa MW: 62716.8 Da PI: 6.978

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	195	238	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e XP_027334397.1 195 DPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVE 238 79***************************************997 PP
2	QLQ	54.2	4.5e-19	138	170	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FT aQ+ +L++Q++++Ky++a++PvPp+Ll++ XP_027334397.1 138 PFTSAQWKELERQAMIFKYMMASVPVPPDLLLP 170 8*****************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MGEFGVSHKE DVKKSSSNNN ASGSSVLGLD VKVQDSEALP NKMMMMMVHH NHHHRPLSPF 60 DNDSCAGDGD GPTTYMSFTN HINLVSDASV LGPAIDGGCG AAAAPVRPLQ PFHTSANTSA 120 TSTFKSSAGG MAASLGFPFT SAQWKELERQ AMIFKYMMAS VPVPPDLLLP SSVTTTPRYP 180 CMDGGFNLRL ASSTDPEPGR CRRTDGKKWR CSRDVAPNHK YCERHMHRGR PRSRKPVEVH 240 TNTITNTLSS NNNNNLQIKR PRHDCNPFPT AGVTVAISNP STRKDASSSH YLAPPTTQPY 300 LESSLSLHNF GVKAANFGSV ASVSSNEEPR GLDWMLNGDP ISLGASDSEW QSLMHNKVGM 360 SSESSCHNTH PQYLNSFALY SSGLDQQNRS LPLFLNPLVV PMESFQSEKP RGFIDAWSNT 420 ETGESNANSN NKNCAASIGK LSLSSLDLSM GGGTAVHEDM GTIEMGLGLM EPDANAHNDT 480 KISLSNWLNP TAPWVASTST PGGPLAEVLR PSTVTATNET TSNPSSPVIT HVESNSPLGT 540 MVSSPSGVLQ KTLASLSDSS SNSSPTIASS RANSEMPLLR FQSNVN

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MGEFGVSHKE DVKKSSSNNN ASGSSVLGLD VKVQDSEALP NKMMMMMVHH NHHHRPLSPF  60
DNDSCAGDGD GPTTYMSFTN HINLVSDASV LGPAIDGGCG AAAAPVRPLQ PFHTSANTSA  120
TSTFKSSAGG MAASLGFPFT SAQWKELERQ AMIFKYMMAS VPVPPDLLLP SSVTTTPRYP  180
CMDGGFNLRL ASSTDPEPGR CRRTDGKKWR CSRDVAPNHK YCERHMHRGR PRSRKPVEVH  240
TNTITNTLSS NNNNNLQIKR PRHDCNPFPT AGVTVAISNP STRKDASSSH YLAPPTTQPY  300
LESSLSLHNF GVKAANFGSV ASVSSNEEPR GLDWMLNGDP ISLGASDSEW QSLMHNKVGM  360
SSESSCHNTH PQYLNSFALY SSGLDQQNRS LPLFLNPLVV PMESFQSEKP RGFIDAWSNT  420
ETGESNANSN NKNCAASIGK LSLSSLDLSM GGGTAVHEDM GTIEMGLGLM EPDANAHNDT  480
KISLSNWLNP TAPWVASTST PGGPLAEVLR PSTVTATNET TSNPSSPVIT HVESNSPLGT  540
MVSSPSGVLQ KTLASLSDSS SNSSPTIASS RANSEMPLLR FQSNVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	8e-30	GRF family protein