PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334325.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 702aa MW: 78494.6 Da PI: 7.3595

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.1	1.7e-23	132	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ + +++ +++l +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_027334325.1 132 FCKILTASDTSTHGGFSVLRKHATEClppldMTPPTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFL--RGEQG 224 99**************************9667777789********************************************..44999 PP ..EEEEE- CS B3 91 elvvkvfr 98 +l+v+v+r XP_027334325.1 225 QLRVGVRR 232 9***98 PP
2	Auxin_resp	102.7	4.8e-34	258	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F+v ++++++a+++k+svGmRfkm+fe++ds+err+sGt+vgv d++p W+nS+WrsLk XP_027334325.1 258 ASHAVMTRTMFLVYYKPRT--SQFIVGLNRYLEAVNNKFSVGMRFKMRFEGDDSPERRFSGTIVGVGDASP-GWSNSQWRSLK 337 689*************6..9******************************************999.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MAHLQCNLRG PGSGCSQPEK GLKDDDLYRE LWKLCAGPLV DVPRTGDRVF YFPQGHMEQL 60 QASTDQELNQ EIPHFNLPSK IFCRVVNIQL LAEQDTDEVY ACIALLPESD QTEPINPDLD 120 VSEAPKQKFH SFCKILTASD TSTHGGFSVL RKHATECLPP LDMTPPTPTQ ELAAKDLHGF 180 EWKFKHIYRG QPRRHLLTTG WSTFVASKRL VAGDAFVFLR GEQGQLRVGV RRLARQQSPM 240 PSSVISSQSM HLGVLATASH AVMTRTMFLV YYKPRTSQFI VGLNRYLEAV NNKFSVGMRF 300 KMRFEGDDSP ERRFSGTIVG VGDASPGWSN SQWRSLKVQW DEPATIPRPD RVSCWEIEPF 360 VASTALNVTQ PVVKGKRSRP NDVSSSGLWY HGSSHSHELT QLGGAAEVQS KENQVVCSLR 420 QKDVNNNPIN ANSSSSRARM EGMWSSSPHL NVTSNLFSDP NNKNSVTVRS SISSYPNVSS 480 RSSDGPTAED VKKTENSLDC WLFGVNLTNK STIVITPSKR ELRCPSLTIV PSGPKESIPA 540 AACESGRVQT PNYSLSNKGQ KQIISDASPN EWQNKQATVP SMRTRTKVQM QGVAVGRALD 600 LTMLNGYDDL IEEIEKLFDI KEELRSQNKW AVTFTDDEND MMLVGDDPWP EFCNMVKRIF 660 VCLREDLKKM KCKLPTSSSE VEETLLSPDS QNRDETQHSH MP

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MAHLQCNLRG PGSGCSQPEK GLKDDDLYRE LWKLCAGPLV DVPRTGDRVF YFPQGHMEQL  60
QASTDQELNQ EIPHFNLPSK IFCRVVNIQL LAEQDTDEVY ACIALLPESD QTEPINPDLD  120
VSEAPKQKFH SFCKILTASD TSTHGGFSVL RKHATECLPP LDMTPPTPTQ ELAAKDLHGF  180
EWKFKHIYRG QPRRHLLTTG WSTFVASKRL VAGDAFVFLR GEQGQLRVGV RRLARQQSPM  240
PSSVISSQSM HLGVLATASH AVMTRTMFLV YYKPRTSQFI VGLNRYLEAV NNKFSVGMRF  300
KMRFEGDDSP ERRFSGTIVG VGDASPGWSN SQWRSLKVQW DEPATIPRPD RVSCWEIEPF  360
VASTALNVTQ PVVKGKRSRP NDVSSSGLWY HGSSHSHELT QLGGAAEVQS KENQVVCSLR  420
QKDVNNNPIN ANSSSSRARM EGMWSSSPHL NVTSNLFSDP NNKNSVTVRS SISSYPNVSS  480
RSSDGPTAED VKKTENSLDC WLFGVNLTNK STIVITPSKR ELRCPSLTIV PSGPKESIPA  540
AACESGRVQT PNYSLSNKGQ KQIISDASPN EWQNKQATVP SMRTRTKVQM QGVAVGRALD  600
LTMLNGYDDL IEEIEKLFDI KEELRSQNKW AVTFTDDEND MMLVGDDPWP EFCNMVKRIF  660
VCLREDLKKM KCKLPTSSSE VEETLLSPDS QNRDETQHSH MP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein