PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027334065.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 905aa MW: 100375 Da PI: 7.2905

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027334065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60	4e-19	340	440	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++ e++ l+++d +g++W++++++ +++s++yvl+ G ++ +L +gD+v+F++++ +++ XP_027334065.1 340 FEKVLSASDAGRIGRLVLPKACAEAYfpSISQSEGVPLRVQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLHAGDTVTFSRID-PGGK 432 99************************777789999***********99899999999.*******************887.7888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_027334065.1 433 LVMGFRKA 440 88887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 905 aa Download sequence
MGSDICVVNG SCTHDWRKGW PLRSDGFAQL CCKCGFMEEW KRDILDPLSA YENSVFCNKF 60 HRQQTGWGEC YFCNKPIHCG CIVSRSLFEY LDFGGIGCVS CVNTSQLSMM RNTENPNGSV 120 SSTKNNASDR HSAQFDGRLF MGGVDEGKLM QFCKIVEASE SSCWNQAQRD GLVARTGQSS 180 QEANNCSFRE RDTGFSNVMK SSVQSLTFAT VENNRSTWEI KNSHESNSQQ SLNMYLGNPS 240 GSNSVPPPAG EAVEGRLEGK ASHPFHQAQR SRPIFPKPLK TGLTMNMETD KGTTSQSRIA 300 RPPAEGRGKN QLLPRYWPRI TDQELERLAG DLKSTVVPLF EKVLSASDAG RIGRLVLPKA 360 CAEAYFPSIS QSEGVPLRVQ DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLHAGD 420 TVTFSRIDPG GKLVMGFRKA SNSTDTQDAS TSAQSNGISA KGTTFSGGTE NLPSGSNHSD 480 LLHSIKGNAE SILNEHAEHH SGTGTAGLLK IESYEMTNNN SLQQQISVLE KKRTRNIGPK 540 SKRLLIDSED AMELKLTWEE AQDLLRPPPS VKPSIVTIED QVFEEYDEPP VFGKRTLFSA 600 CSSGGKEQWA QCDDCSKWRK LPVDALLPPK WTCSENVWDS SRSSCSALEE LSSRELENLL 660 KTSKDIKKRR IIESNKSIQE PEPSGLDALA SAAVLGENLL DPAAESSTGA TTKHPRHRPG 720 CSCIVCIQPP SGKGRHKPTC TCNVCMTVKR RFKTLMLRKK KRQSEREADA AQKDQVHQKD 780 ESDATGASRD DTSHLEKEGG LKRSQHEVGE SCAGQIDLNS HPNREDMQVD TTALGMPSHL 840 ETTNHTPREY VNQNGLRSFN SELHANDHSL HTQSNERCFT SIVWNQEKRK DDVHNHPNQS 900 QNNLS

Sequence ? help Back to Top

Protein Sequence Length: 905 aa Download sequence

MGSDICVVNG SCTHDWRKGW PLRSDGFAQL CCKCGFMEEW KRDILDPLSA YENSVFCNKF  60
HRQQTGWGEC YFCNKPIHCG CIVSRSLFEY LDFGGIGCVS CVNTSQLSMM RNTENPNGSV  120
SSTKNNASDR HSAQFDGRLF MGGVDEGKLM QFCKIVEASE SSCWNQAQRD GLVARTGQSS  180
QEANNCSFRE RDTGFSNVMK SSVQSLTFAT VENNRSTWEI KNSHESNSQQ SLNMYLGNPS  240
GSNSVPPPAG EAVEGRLEGK ASHPFHQAQR SRPIFPKPLK TGLTMNMETD KGTTSQSRIA  300
RPPAEGRGKN QLLPRYWPRI TDQELERLAG DLKSTVVPLF EKVLSASDAG RIGRLVLPKA  360
CAEAYFPSIS QSEGVPLRVQ DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLHAGD  420
TVTFSRIDPG GKLVMGFRKA SNSTDTQDAS TSAQSNGISA KGTTFSGGTE NLPSGSNHSD  480
LLHSIKGNAE SILNEHAEHH SGTGTAGLLK IESYEMTNNN SLQQQISVLE KKRTRNIGPK  540
SKRLLIDSED AMELKLTWEE AQDLLRPPPS VKPSIVTIED QVFEEYDEPP VFGKRTLFSA  600
CSSGGKEQWA QCDDCSKWRK LPVDALLPPK WTCSENVWDS SRSSCSALEE LSSRELENLL  660
KTSKDIKKRR IIESNKSIQE PEPSGLDALA SAAVLGENLL DPAAESSTGA TTKHPRHRPG  720
CSCIVCIQPP SGKGRHKPTC TCNVCMTVKR RFKTLMLRKK KRQSEREADA AQKDQVHQKD  780
ESDATGASRD DTSHLEKEGG LKRSQHEVGE SCAGQIDLNS HPNREDMQVD TTALGMPSHL  840
ETTNHTPREY VNQNGLRSFN SELHANDHSL HTQSNERCFT SIVWNQEKRK DDVHNHPNQS  900
QNNLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	749	760	KRRFKTLMLRKK
2	749	762	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein