PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25456.4 Da PI: 5.3035 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.3e-18 | 32 | 82 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g XP_027333406.1 32 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 82 59*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MVKTENKVQP EPSKPTLRPL PSSPASNENK KKKYKGVRMR SWGSWVSEIR APNQKTRIWL 60 GSYSTAEAAA RAYDAALLCL KGSSANLNFP SSSSHYIPQE TVMSPKSIQR VAAAAANSFV 120 DNNNNAIAST PPSPPLASTS SSSLVSSPSL SSSPSDHIED DVSLLSPFEA YTTTSCEQPH 180 ASMAMMESWY GLDGLQSPKY VDQMLSGAFF DIDSTQLLDD LYEESGDIRL WSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 6e-30 | ERF family protein |