PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333378.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 365aa MW: 41485.1 Da PI: 9.2303

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C k F r nL+ H r H XP_027333378.1 80 FFCDICQKGFQRDQNLQLHRRGH 102 67*******************88 PP
2	zf-C2H2	13.1	0.00028	187	205	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H ++ XP_027333378.1 187 DCGTVFSRRDYFITHRASC 205 9**************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MMKGLVVEEN MSNLTSASSE ISGSSGTRYD NTSDLYYAQY SSASNQEPQL KRKRRVPGHP 60 DPGAEVIALT PQTLLATNRF FCDICQKGFQ RDQNLQLHRR GHNLPWKLKK RNIKEARKKV 120 YVCPEPTCLH HDPLRALGDL TGIKKHFFRK HHAEKKWKCE KCSKCYAVHS DWKAHSKICG 180 TREYICDCGT VFSRRDYFIT HRASCDALTQ ESGRLNLEDN AKFHSHVLQA PSLKREQEFN 240 LGLSRTPSWL ASPMAEEVVH DQTNRALDFS SSPLFPTHVN HENPNPTTTL LRSFHSITSS 300 PQMSSATPLM QKASQIGVTM SKITPSEALL RPHLLLQEIH VPEYTTRYMA SSSAFYGMVI 360 PSREE

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MMKGLVVEEN MSNLTSASSE ISGSSGTRYD NTSDLYYAQY SSASNQEPQL KRKRRVPGHP  60
DPGAEVIALT PQTLLATNRF FCDICQKGFQ RDQNLQLHRR GHNLPWKLKK RNIKEARKKV  120
YVCPEPTCLH HDPLRALGDL TGIKKHFFRK HHAEKKWKCE KCSKCYAVHS DWKAHSKICG  180
TREYICDCGT VFSRRDYFIT HRASCDALTQ ESGRLNLEDN AKFHSHVLQA PSLKREQEFN  240
LGLSRTPSWL ASPMAEEVVH DQTNRALDFS SSPLFPTHVN HENPNPTTTL LRSFHSITSS  300
PQMSSATPLM QKASQIGVTM SKITPSEALL RPHLLLQEIH VPEYTTRYMA SSSAFYGMVI  360
PSREE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	119	KLKKRNIKEARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	2e-87	C2H2 family protein