PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333376.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 332aa MW: 37928.9 Da PI: 4.5831

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7.1e-12	169	212	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L XP_027333376.1 169 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 212 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MELYDHDFLE ELMSLRRETW DTNPCLEENH VFSNGLSFDC YNQNSSTFLP NSSSCQEVPQ 60 SYNNDYAFNE IYSSLLDDFS APQILDSSYN TLDTPLSNFA FIAQEDYPMS MMMEEDPGLL 120 GEELHSLDLQ TTCKVEPNHS PEMPVFNRDT CVERKNRAKK MQGQPSKNLM AERRRRKRLN 180 DRLSMLRSIV PKISKMDRTS ILGDTIDYMK ELLEKINNLK QEIEADSNIA SILKDVKPNE 240 ILVRNSPKFD VERRNVNTRV EICCGAKPGL LLSTVNTLEA LGLEIQQCVI SCFNDFTMQA 300 SCSEELKQKT IMSSEDIKQA LFRSAGYGGP CL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	172	179	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	8e-83	bHLH family protein