PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027333318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NAC | ||||||||
Protein Properties | Length: 359aa MW: 39858.4 Da PI: 9.1958 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.7 | 1.1e-53 | 18 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++ +l++ +i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ XP_027333318.1 18 LPPGFRFHPTDEELVVHYLKRKADSAPLPV-AIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILAS 111 79****************************.88***************8888899**************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl XP_027333318.1 112 hGHHKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 145 67788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MMYNMDSPSG SHSQHPQLPP GFRFHPTDEE LVVHYLKRKA DSAPLPVAII ADVDLYKFDP 60 WELPSKAAFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPILA SHGHHKVGVK 120 KALVFYGGKP PKGVKTNWIM HEYRLVDNSS NSTSKPPPLA PHHAHSNKKS SLRLDDWVLC 180 RIYKKSNSTI SVPRVPMVDQ DREVSTESTM LQTLSTLSMA NNNTHQNSKS TSSRSASYGP 240 LGLENDDTFF DGFLAADQSV QDGCDSRQVS SNARGNFPVK QALSSQFWND TGSSSSSRRF 300 HCDLSNGSST AEENNSFYSL LGQLPHNATF HPNGLLGHVG DGVLRQQVQL QLPSINWKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-107 | NAC family protein |