PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027333196.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 306aa MW: 33990.4 Da PI: 7.2357

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027333196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.2	3e-13	103	154	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_027333196.1 103 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 154 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MALEAVVFPQ DPFTYGCKDY MYSLVGGFQG SEDKALVGII NNNKEHNLHA NWESSSSPSV 60 LQNVKDQWDS HSSPEPTPTN TTTGRRKRRR TKSTKNKEEI ENQRMTHIAV ERNRRKQMNE 120 YLAVLRSLMP PSYVQRGDQA SIIGGAINFV KELEQLLQCM KCQKKTKEQG QVNGLGDSSP 180 FSEFFMFPQY STRATQSNTG YPATSDGNTA QNHSWAVADI EVTLVDSHAN IKILSKKRPG 240 LLLKMVVGLQ SIGLIILHLN VTTVDDMVLT SVSVKVEEGC QLNTVDEIAA AVNQLSLTVH 300 EEAAFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	90	RKRRR
2	86	91	RKRRRT
3	104	115	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-89	bHLH family protein