PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332894.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 294aa MW: 32919.7 Da PI: 6.6672

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.3	1.5e-19	138	192	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq +Lee F+++++++ ++++eLA+kl+L rqV vWFqNrRa+ k XP_027332894.1 138 RKKLRLTKEQSAVLEENFKEHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTK 192 78889************************************************98 PP
2	HD-ZIP_I/II	121.5	4.2e-39	138	226	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq+++LEe+F+e+++L+p++K+ela +L+l++rqv+vWFqnrRARtk+kq+E+d+e Lk+++d+l+een+rL+ke +eL++ XP_027332894.1 138 RKKLRLTKEQSAVLEENFKEHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTKLKQTESDCELLKNCCDTLTEENKRLQKELQELKS 226 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGFHDTSTTG LPLGLGLGLG LGLGFHDQSE NCTKVDDHKQ RESHKKKVDK PSKCNNAYPS 60 LTLGPPEDDE LHNQQNTNTE SYEYFPPQDS SPSAVSSFSN SSSIKRERDQ ALGEEFEVEV 120 EKIPTRVVGD VDEDGNPRKK LRLTKEQSAV LEENFKEHST LNPKQKQELA MKLNLRARQV 180 EVWFQNRRAR TKLKQTESDC ELLKNCCDTL TEENKRLQKE LQELKSMQTT PLPFYMQIPA 240 ATLSICPSCE RICGGNSDSG NGSSPTTTLL IGSKTHHHFY KSNYAFPHSS SAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	195	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-60	HD-ZIP family protein