PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027332828.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 294aa    MW: 32003.7 Da    PI: 7.6948
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027332828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00037110132123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C++ F ++  L  H++ H
  XP_027332828.1 110 FSCNYCHRKFYSSQALGGHQNAH 132
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEGLSKEPYL CDRSSIMLSS IPEAPPSPST PLQNPHEKKQ QSLEEEEEEK ETKHNTLLDL  60
NVSGDDYTLG CSPQGLELNL ITCLDMGSSS SNANSSETPL GGSDAEPRVF SCNYCHRKFY  120
SSQALGGHQN AHKRERSIAK RGHRFGTQLM ASAAAFGLPF VHNNRFASMA SLPLYGACNN  180
RSLGIQAHSM IHKPSHVNGF GSSYGYHHHG WSRPIIDHQP GIAKLAGVAD FHRTKSTLSS  240
PSQNSVGRFE VVSPMINSAA NKDISGYVVV SGGTRVKSTN NQDEMKHLDL SLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.15e-44C2H2 family protein