PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332667.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 574aa MW: 63215.4 Da PI: 8.1833

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.1e-23	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+ltpsd+++ g +++p+ +a+++ + ++ + l+++d +g +W++++iyr++++r++lt+GW++Fv+ ++L +gD+vvF ++s XP_027332667.1 124 FSKILTPSDANNGGGFSVPRFCADSIfpplnfdDDPPVQ--VLSVTDVHGVTWQFRHIYRGTPRRHLLTTGWSKFVNHKKLVAGDSVVFV--KDS 214 88*******************999*96555555..7********************************************..679 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++ +v+++r+ XP_027332667.1 215 DGKVFVGIRRA 225 9999**985 PP
2	Auxin_resp	75.7	1.3e-25	260	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 +++aa k +FevvY+Pr++ ++Fvvk+e ve+a+k+ + GmR+km +etedss+ ++ +Gtv++ s+++ n +Wr+L+ XP_027332667.1 260 VVEAAGRKVPFEVVYYPRTGLADFVVKAEIVEEAMKIMWVGGMRVKMGMETEDSSRMTWfQGTVSSASASE-----NGPWRMLQ 338 57889999***********************************************************9955.....57777775 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MPPPHPRRVD QKLWQACAGA TVKIPALHSR VYYFPRGQME HASPSRNLSL PPLIRSLPFV 60 PCYVSALDYL ADPLSDEVFA KLLLTPLTHT HNQNDVVVSP RFLTPLSHLH SPNDDDNRNA 120 VVSFSKILTP SDANNGGGFS VPRFCADSIF PPLNFDDDPP VQVLSVTDVH GVTWQFRHIY 180 RGTPRRHLLT TGWSKFVNHK KLVAGDSVVF VKDSDGKVFV GIRRALRFAK GEVAEEEMPA 240 NEGFSRSARG RVSARAVAAV VEAAGRKVPF EVVYYPRTGL ADFVVKAEIV EEAMKIMWVG 300 GMRVKMGMET EDSSRMTWFQ GTVSSASASE NGPWRMLQVN WDEPEVLQNA KQVSPWQVEL 360 VSPVPTLHTA YPPAKRFRAD QGSGLLSGRE DREGDPFFPM TGSPNLTIGH LNKELLSYDT 420 SPAGMQGARH DLFSASSFSN FLNDNSYPHM DNFSSGNNKL PRAGTVSTEL NIGSPQSDDL 480 SPHSQSSFHS IDTQVAGTHN GNSKVGSGSI QLFGLMSNVN DPPQSRHVIC ETSYADKKLY 540 RHSRLVGKHE TVNSCPCSGK SIFRLSFFVG LTAT

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MPPPHPRRVD QKLWQACAGA TVKIPALHSR VYYFPRGQME HASPSRNLSL PPLIRSLPFV  60
PCYVSALDYL ADPLSDEVFA KLLLTPLTHT HNQNDVVVSP RFLTPLSHLH SPNDDDNRNA  120
VVSFSKILTP SDANNGGGFS VPRFCADSIF PPLNFDDDPP VQVLSVTDVH GVTWQFRHIY  180
RGTPRRHLLT TGWSKFVNHK KLVAGDSVVF VKDSDGKVFV GIRRALRFAK GEVAEEEMPA  240
NEGFSRSARG RVSARAVAAV VEAAGRKVPF EVVYYPRTGL ADFVVKAEIV EEAMKIMWVG  300
GMRVKMGMET EDSSRMTWFQ GTVSSASASE NGPWRMLQVN WDEPEVLQNA KQVSPWQVEL  360
VSPVPTLHTA YPPAKRFRAD QGSGLLSGRE DREGDPFFPM TGSPNLTIGH LNKELLSYDT  420
SPAGMQGARH DLFSASSFSN FLNDNSYPHM DNFSSGNNKL PRAGTVSTEL NIGSPQSDDL  480
SPHSQSSFHS IDTQVAGTHN GNSKVGSGSI QLFGLMSNVN DPPQSRHVIC ETSYADKKLY  540
RHSRLVGKHE TVNSCPCSGK SIFRLSFFVG LTAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-148	ARF family protein