PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332655.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SRS

Protein Properties

Length: 338aa MW: 34931.6 Da PI: 8.4997

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	213.9	3.9e-66	112	272	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 sg+++CqdCGnqakkdCa +RCRtCCksrgfdC thvkstWvpaa+rrerq + aa+++ a +s +++ +k++r +++++++s+t++s+++++ XP_027332655.1 112 SGGTTCQDCGNQAKKDCANRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMVAATAAVAGSSGSTSGTKKPRLI-ASQTTTTSHTSTSNTTPP 205 7889*************************************************999999999999999999986.88899999****** PP DUF702 98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++++t s lP +v+++avf+cvrvs ++dg++e+aYq++v+i+GhvfkG+LydqG+e+ XP_027332655.1 206 RSFDTGSshqdasfkesLPGQVRAPAVFKCVRVSPMEDGQDEFAYQAVVKIAGHVFKGFLYDQGAET 272 99999*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MGMFVVAPAS SFHHHHHHHP PQQPHDPLIA GDSLNPATAL GVGVIPLLTA TPCLESDNIL 60 GNRTRGAGIQ FWQDQSPQQS HYLKKQQGLL EHSGNMVQGG GGGVSASGGS SSGGTTCQDC 120 GNQAKKDCAN RRCRTCCKSR GFDCPTHVKS TWVPAARRRE RQLMVAATAA VAGSSGSTSG 180 TKKPRLIASQ TTTTSHTSTS NTTPPRSFDT GSSHQDASFK ESLPGQVRAP AVFKCVRVSP 240 MEDGQDEFAY QAVVKIAGHV FKGFLYDQGA ETRDVYPNLS ELHLGGGNGG SGSGGSGGGG 300 VGRNGVSSSS PMMDPSDVYA ASGGGLLGGS STYGNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	9e-66	SRS family protein