PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332652.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 358aa MW: 39558.1 Da PI: 9.6274

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	93.9	3.2e-29	51	159	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.......ka 90 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl++ k i++l+ ++ ++ +++ ++++ ++s+ + +a XP_027332652.1 51 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLEATKSDIDKLPPLQIPHY-FAQFHQQNLLPGTSH-QfslggfyDA 143 78*************************************************************55554.442222222222111.1234566633 PP TCP 91 aksaa.kskksqksaa 105 a+s+ k +q++ a XP_027332652.1 144 ANSTFiKDGGNQNHMA 159 3333334444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MIESSSRGYE GNQQQEGEFI KIEKLSKAPS TSRQWSAFRN PRIVRVSRSM GGKDRHSKVC 60 TIRGLRDRRI RLSVPTAIQL YDLQDRLGLN QPSKVVDWLL EATKSDIDKL PPLQIPHYFA 120 QFHQQNLLPG TSHQFSLGGF YDAANSTFIK DGGNQNHMAK YWDIDSLKGK ELAESASISQ 180 RGKCWIKTNE QENQDGVGAG THNREESAQR FFPIGTNSSL PGLLNNAMTY NSYHHSEPST 240 LSLSQFGSHG LFPSYPNSGS GVQFSSSSLS VPSGSQLLFC PPSATPSAFY SVESDPRQSN 300 NNIQISNSSS QIMMPHPLIQ SLHSINSPLR LLPTPFSSKL LDSDTNNRSP PGKGSTRS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MIESSSRGYE GNQQQEGEFI KIEKLSKAPS TSRQWSAFRN PRIVRVSRSM GGKDRHSKVC  60
TIRGLRDRRI RLSVPTAIQL YDLQDRLGLN QPSKVVDWLL EATKSDIDKL PPLQIPHYFA  120
QFHQQNLLPG TSHQFSLGGF YDAANSTFIK DGGNQNHMAK YWDIDSLKGK ELAESASISQ  180
RGKCWIKTNE QENQDGVGAG THNREESAQR FFPIGTNSSL PGLLNNAMTY NSYHHSEPST  240
LSLSQFGSHG LFPSYPNSGS GVQFSSSSLS VPSGSQLLFC PPSATPSAFY SVESDPRQSN  300
NNIQISNSSS QIMMPHPLIQ SLHSINSPLR LLPTPFSSKL LDSDTNNRSP PGKGSTRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-52	TCP family protein