PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027332004.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 622aa    MW: 69477 Da    PI: 6.4364
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027332004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.52.1e-22127229198
                     EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+k+lt sd++++g +++ +++a+++         +++    ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   +
  XP_027332004.1 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmsqaQQP--PWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--R 217
                     99****************************99964333..3459************************************************..4 PP

                     SSEE..EEEEE- CS
              B3  87 rsefelvvkvfr 98 
                      +++el+v+v+r
  XP_027332004.1 218 GESGELRVGVRR 229
                     49999*****97 PP
2Auxin_resp112.63.7e-37255336182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+++++err+sGt+vgv d +++ Wp+S+WrsL
  XP_027332004.1 255 ASHAINTGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSLVWPDSEWRSL 336
                     789******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    
MAFTAPNHKS GGIHAGAIND DLYKELWHAC AGPLVTLPHE GERVYYFPQG HMEQLEASMY  60
EGLEQQMPSF NLPSKILCKV VNVHLRAEPE TDEVYAQITL HPEADQSEVT SPDDPLPESP  120
RVKVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ AQQPPWQELV ATDLHGNEWH  180
FRHIFRGQPR RHLLTTGWSV FVSSKKLVAG DAFIFLRGES GELRVGVRRL MRQQSNVPSS  240
VISSHSMHLG VLATASHAIN TGTLFSVFYK PRTSRSEFIV SVNKYLEAQS HKLSVGMRFK  300
MRFEGDEVPE RRFSGTIVGV GDNKSLVWPD SEWRSLRVQW DEPSSILRPD RVSSWELEPL  360
ASTTPANSQP TQRNKRARPI ILPSTMSDSS MQGIWKSPVE STPFSYCDPQ HGRGLYPSPK  420
FNSSATNFLG FSGNGSVGPP SNKSIYWSNR VENSMESIAL KEAGEKRQGT VNGCRLFGIQ  480
LSENSNAEGS LQTVTLSGRV VDDRSVPSLD AESDQHSEPS NANRSDIPTV SCDAEKSCLQ  540
SPQESQSKQI RSCTKVHMQG MAVGRAVDLT RFDGYEDLLR RLEEMFDIKS ELCGSLKKWQ  600
VVYTDNEDDM MMVGDDPWHL LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein