PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027332001.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 679aa MW: 75726.1 Da PI: 6.4379

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027332001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63	4.8e-20	127	233	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvF 82 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g++W +++i+ ++++r++lt+GW+ Fv++++L +gD ++F XP_027332001.1 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmsqaQQP--PWQELVATDLHGNEWHFRHIFrekfPGQPRRHLLTTGWSVFVSSKKLVAGDAFIF 219 99**************************99964333..3459***********998777788999********************** PP EE-SSSEE..EEEEE- CS B3 83 kldgrsefelvvkvfr 98 + +++el+v+v+r XP_027332001.1 220 L--RGESGELRVGVRR 233 ..449999****97 PP
2	Auxin_resp	112.5	4.2e-37	259	340	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+++++err+sGt+vgv d +++ Wp+S+WrsL XP_027332001.1 259 ASHAINTGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSLVWPDSEWRSL 340 789******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MAFTAPNHKS GGIHAGAIND DLYKELWHAC AGPLVTLPHE GERVYYFPQG HMEQLEASMY 60 EGLEQQMPSF NLPSKILCKV VNVHLRAEPE TDEVYAQITL HPEADQSEVT SPDDPLPESP 120 RVKVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ AQQPPWQELV ATDLHGNEWH 180 FRHIFREKFP GQPRRHLLTT GWSVFVSSKK LVAGDAFIFL RGESGELRVG VRRLMRQQSN 240 VPSSVISSHS MHLGVLATAS HAINTGTLFS VFYKPRTSRS EFIVSVNKYL EAQSHKLSVG 300 MRFKMRFEGD EVPERRFSGT IVGVGDNKSL VWPDSEWRSL RVQWDEPSSI LRPDRVSSWE 360 LEPLASTTPA NSQPTQRNKR ARPIILPSTM SDSSMQGIWK SPVESTPFSY CDPQHGRGLY 420 PSPKFNSSAT NFLGFSGNGS VGPPSNKSIY WSNRVENSME SIALKEAGEK RQGTVNGCRL 480 FGIQLSENSN AEGSLQTVTL SGRVVDDRSV PSLDAESDQH SEPSNANRSD IPTVSCDAEK 540 SCLQSPQESQ SKQIRSCTKV HMQGMAVGRA VDLTRFDGYE DLLRRLEEMF DIKSELCGSL 600 KKWQVVYTDN EDDMMMVGDD PWHEFCTVVR KIFIYTSEEV KKLSPKIGLP INEKVKPGKL 660 DSEAIVNPED QSSTVGPGC

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MAFTAPNHKS GGIHAGAIND DLYKELWHAC AGPLVTLPHE GERVYYFPQG HMEQLEASMY  60
EGLEQQMPSF NLPSKILCKV VNVHLRAEPE TDEVYAQITL HPEADQSEVT SPDDPLPESP  120
RVKVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMSQ AQQPPWQELV ATDLHGNEWH  180
FRHIFREKFP GQPRRHLLTT GWSVFVSSKK LVAGDAFIFL RGESGELRVG VRRLMRQQSN  240
VPSSVISSHS MHLGVLATAS HAINTGTLFS VFYKPRTSRS EFIVSVNKYL EAQSHKLSVG  300
MRFKMRFEGD EVPERRFSGT IVGVGDNKSL VWPDSEWRSL RVQWDEPSSI LRPDRVSSWE  360
LEPLASTTPA NSQPTQRNKR ARPIILPSTM SDSSMQGIWK SPVESTPFSY CDPQHGRGLY  420
PSPKFNSSAT NFLGFSGNGS VGPPSNKSIY WSNRVENSME SIALKEAGEK RQGTVNGCRL  480
FGIQLSENSN AEGSLQTVTL SGRVVDDRSV PSLDAESDQH SEPSNANRSD IPTVSCDAEK  540
SCLQSPQESQ SKQIRSCTKV HMQGMAVGRA VDLTRFDGYE DLLRRLEEMF DIKSELCGSL  600
KKWQVVYTDN EDDMMMVGDD PWHEFCTVVR KIFIYTSEEV KKLSPKIGLP INEKVKPGKL  660
DSEAIVNPED QSSTVGPGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein