PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331820.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 350aa MW: 40486 Da PI: 8.2878

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.6	1.3e-12	40	96	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa+a++ a++k++g XP_027331820.1 40 SIYRGVTRHRWTGRYEAHLWDkHCWNEsQNKKGRQGAYDNEEAAARAYDLAALKYWG 96 57*********************9998888888******************98 PP
2	AP2	51.5	2.5e-16	139	190	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++++grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_027331820.1 139 SKYRGVARHHYNGRWEARIGKvF---G-NKYLYLGTYATQEEAATAYDLAAIEYRG 190 89**************99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MAKTSQVRNN ASNSNNLNTV TTKVKRKRSV PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD 60 KHCWNESQNK KGRQGAYDNE EAAARAYDLA ALKYWGQDTI INFPLSNYQN EMKEMEGQSR 120 EEYIGSIRRK SSGFSRGVSK YRGVARHHYN GRWEARIGKV FGNKYLYLGT YATQEEAATA 180 YDLAAIEYRG LNAVTNFDLS RYIKRLKPIN NNNNRISIHL TNINHNCDTN FTPNPNQEQE 240 FSFFHNEDSL NNIGEEATSV PTQPRPAGAT SALELLLQST KFKEMMEMTS VASLSTQLES 300 GLPRCKFPDH IQTYFEYEDF NRYEQVDDIL FHDLNSIVPM LHCDQFDFEI

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MAKTSQVRNN ASNSNNLNTV TTKVKRKRSV PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD  60
KHCWNESQNK KGRQGAYDNE EAAARAYDLA ALKYWGQDTI INFPLSNYQN EMKEMEGQSR  120
EEYIGSIRRK SSGFSRGVSK YRGVARHHYN GRWEARIGKV FGNKYLYLGT YATQEEAATA  180
YDLAAIEYRG LNAVTNFDLS RYIKRLKPIN NNNNRISIHL TNINHNCDTN FTPNPNQEQE  240
FSFFHNEDSL NNIGEEATSV PTQPRPAGAT SALELLLQST KFKEMMEMTS VASLSTQLES  300
GLPRCKFPDH IQTYFEYEDF NRYEQVDDIL FHDLNSIVPM LHCDQFDFEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	9e-92	AP2 family protein