PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331781.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 526aa MW: 57000.4 Da PI: 8.443

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331781.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3.1e-15	149	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_027331781.1 149 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 208 57*****************666664477446***********************98 PP
2	AP2	47.2	5.5e-15	251	302	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027331781.1 251 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 302 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MDSSSSSPPN NNNNSLAFSL SNHFPNPPSS HSSSHLSLFN SFTYPSLTLT GSTTVDASPE 60 ATDGTARGTI NLSIFTGGPK FEDFLGGSAA TTTSTCAPPN LPQFPTDNNI YDSEMKTTIA 120 ACFPRGFAAT EPRKPSPKKT VDTFGQRTSI YRGVTRHRWT GRYEAHLWDN SCRREGQSRK 180 GRQVYLGGYD KEEKAARAYD LAALKYWGPT TTTNFPISNY EKELEEMKNM TRQEFVASLR 240 RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF 300 RGLNAVTNFD MSRYDVKSIA NSTLPIGGLS SKNKNSADCL SESKSHDASR SDERDPSSAS 360 SVTFASHQPS SSTLSFAIPI KQDPSDYWSI LGYHNPSLEN SGVRNTTNVT TTTSFPSSNN 420 ATASTTPFHM DFSTCPSNTS NDNNAAFFSG GIYVQQQSGG CGGGNSGSPS TSSSCSIPFA 480 TPIFSLNSNS SYESGSGYGN WIGPTLHTFQ THAKPSLFQT PIFGME

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MDSSSSSPPN NNNNSLAFSL SNHFPNPPSS HSSSHLSLFN SFTYPSLTLT GSTTVDASPE  60
ATDGTARGTI NLSIFTGGPK FEDFLGGSAA TTTSTCAPPN LPQFPTDNNI YDSEMKTTIA  120
ACFPRGFAAT EPRKPSPKKT VDTFGQRTSI YRGVTRHRWT GRYEAHLWDN SCRREGQSRK  180
GRQVYLGGYD KEEKAARAYD LAALKYWGPT TTTNFPISNY EKELEEMKNM TRQEFVASLR  240
RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF  300
RGLNAVTNFD MSRYDVKSIA NSTLPIGGLS SKNKNSADCL SESKSHDASR SDERDPSSAS  360
SVTFASHQPS SSTLSFAIPI KQDPSDYWSI LGYHNPSLEN SGVRNTTNVT TTTSFPSSNN  420
ATASTTPFHM DFSTCPSNTS NDNNAAFFSG GIYVQQQSGG CGGGNSGSPS TSSSCSIPFA  480
TPIFSLNSNS SYESGSGYGN WIGPTLHTFQ THAKPSLFQT PIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-140	AP2 family protein