PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331602.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TALE

Protein Properties

Length: 360aa MW: 40467.5 Da PI: 6.5541

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	286	322	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_027331602.1 286 HYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 322 45679*****************************885 PP
2	ELK	37.8	4.1e-13	242	263	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlr YsgyLgsLkqEF+ XP_027331602.1 242 ELKGQLLRRYSGYLGSLKQEFM 263 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MEGNSSVMGF GENTTSSGVC PMMMMPLVTS HHVGHHPINP NLNNPNPNPS EDTNISFLPS 60 PCNNNHQHIN RNIMLDSNHN ANTSGLGYFM DIHNTNNDGS SSSSSSAVKA KIMAHPHYHR 120 LLAAYVNCQK VGAPPEVVAR LEEACASAAV TMAGGTACIG EDPALDQFME AYCEMLIKYE 180 QELSKPFKEA MLFLQRIEGQ FKSLTISSSS DTACNEATDR NGSSEDVDVH NNLIDPQAED 240 QELKGQLLRR YSGYLGSLKQ EFMKKRKKGK LPKEARQQLL EWWSRHYKWP YPSESQKLAL 300 AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FVVVDPSHPH YYMENVLGNP FPMDLSHTML

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MEGNSSVMGF GENTTSSGVC PMMMMPLVTS HHVGHHPINP NLNNPNPNPS EDTNISFLPS  60
PCNNNHQHIN RNIMLDSNHN ANTSGLGYFM DIHNTNNDGS SSSSSSAVKA KIMAHPHYHR  120
LLAAYVNCQK VGAPPEVVAR LEEACASAAV TMAGGTACIG EDPALDQFME AYCEMLIKYE  180
QELSKPFKEA MLFLQRIEGQ FKSLTISSSS DTACNEATDR NGSSEDVDVH NNLIDPQAED  240
QELKGQLLRR YSGYLGSLKQ EFMKKRKKGK LPKEARQQLL EWWSRHYKWP YPSESQKLAL  300
AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FVVVDPSHPH YYMENVLGNP FPMDLSHTML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	267	LKQEFMKKRK
2	264	268	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-135	TALE family protein