PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331403.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 607aa MW: 69771 Da PI: 5.0896

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	293	314	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 + C Cgk F++ + k+H ++ XP_027331403.1 293 FYCVLCGKKFKSEKQWKNHEQS 314 78*****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MATAKRCHYE VLGLPRECTA DEIRSAYRRL ALQRHPDKLV QSGLSQADAT AQFQELQHAY 60 EVLSDPKERA WYDSHRSQIL YCEPNSRNNS IVTDLFSFFS NTVYSGYSDS GKGFYKVYSD 120 VFDRIHANEI NFAKKMGIGV EAVRPAPVMG NLDSPYEQVT AFYGYWLGFC TVMDFCWVDE 180 FNVMAGPNRK SRRLMEEENN KVRRRARKEY NDTVRKLGDF VKKRDKRVVD MKVKKNLEME 240 KKRAEERERK KRLEKERKER VMAYEEPEWA KVEEEEEVVV EEWFEEMEEK KEFYCVLCGK 300 KFKSEKQWKN HEQSKKHKEK VAEFRDSLDD EEDLELDVEE EGEREGMEHE EDAIAENDDQ 360 GETDSVVNDL ESRIRDGLNV ADEETRNEAE LIDDDDDEFS DALHAEKGEE ELSVRFDDND 420 DDENDVLEAM MAGQKNRKPG ASTHKPKASV APSQIESESD GIGFPEYNNR KSTRKKRGAK 480 KEKGRKHWEE SNVAAANGNY ENVNSNGNDN SNAEESVSQH SVENEINGKE GEQVGRNKKI 540 SNQAAADKKG TAKDPKSKAK NSSKGRKGKM ISKSLGNACE TCGEEFESRN KLHQHLGDSG 600 HATLKCR

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MATAKRCHYE VLGLPRECTA DEIRSAYRRL ALQRHPDKLV QSGLSQADAT AQFQELQHAY  60
EVLSDPKERA WYDSHRSQIL YCEPNSRNNS IVTDLFSFFS NTVYSGYSDS GKGFYKVYSD  120
VFDRIHANEI NFAKKMGIGV EAVRPAPVMG NLDSPYEQVT AFYGYWLGFC TVMDFCWVDE  180
FNVMAGPNRK SRRLMEEENN KVRRRARKEY NDTVRKLGDF VKKRDKRVVD MKVKKNLEME  240
KKRAEERERK KRLEKERKER VMAYEEPEWA KVEEEEEVVV EEWFEEMEEK KEFYCVLCGK  300
KFKSEKQWKN HEQSKKHKEK VAEFRDSLDD EEDLELDVEE EGEREGMEHE EDAIAENDDQ  360
GETDSVVNDL ESRIRDGLNV ADEETRNEAE LIDDDDDEFS DALHAEKGEE ELSVRFDDND  420
DDENDVLEAM MAGQKNRKPG ASTHKPKASV APSQIESESD GIGFPEYNNR KSTRKKRGAK  480
KEKGRKHWEE SNVAAANGNY ENVNSNGNDN SNAEESVSQH SVENEINGKE GEQVGRNKKI  540
SNQAAADKKG TAKDPKSKAK NSSKGRKGKM ISKSLGNACE TCGEEFESRN KLHQHLGDSG  600
HATLKCR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	226	RKSRRLMEEENNKVRRRARKEYNDTVRKLGDFVKKRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-113	C2H2 family protein