PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027331358.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CAMTA

Protein Properties

Length: 964aa MW: 107934 Da PI: 7.4063

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027331358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.7	5.9e-55	24	138	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl++ ei++iL n++k+elt +++ rp+ gsl+L+nrk +ryfrkDG+ w+kkkdgktvrE+hekLK g+ +vl+cyYah+e+n++fqrr XP_027331358.1 24 EaEHRWLRPAEICEILRNYRKFELTPNPPVRPPGGSLFLFNRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSLDVLHCYYAHGEDNENFQRR 118 449****************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylev 117 +yw+L+e+le+ivlvhy+e XP_027331358.1 119 SYWMLDEQLEHIVLVHYREI 138 ***************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MTNTRNSNYI RNAQLVGFEE ILREAEHRWL RPAEICEILR NYRKFELTPN PPVRPPGGSL 60 FLFNRKALRY FRKDGHRWRK KKDGKTVREA HEKLKAGSLD VLHCYYAHGE DNENFQRRSY 120 WMLDEQLEHI VLVHYREIKE GCRSCISHSP VVPVTLVGSS QNSSVPSSTK INSQISVVQT 180 SFTSSANKVG QNGQASEYED VNSETQASSH DQPISKSMLH NAPQLAHEAT GFSELLRSPL 240 ISSLSSSFPS QSPGTGLSTW TLIPNYSRNT INMHDGERHV EGSVEGSETD FNVQKLSNAR 300 LDVDCRIQDG VIFRDRLITN TYIQPVKGAS QTVNQVQKED GLDSFRTQCP DHADHPDATT 360 TILVEQKLQD DDTDNDESER VESGKLKKLD SFGRWMDKEI GGDCDNSLMA SDSGNYWSTL 420 DAQNEDKEVS SLHHMQLDQG NSLGPSLSQE QLFSIHDFSP DWAYTGVKTK VLIAGTFLGS 480 KKLSSETKWG CMFGEIEVSA EVLAENVIRC QTPLHSPGRV PFYVTCSNRL ACSEVREFEY 540 LETPTKFLRP VGIKISAEDE IRLQMRLLKL VDLGADNKQW KCSVSECEKC KLKGTMYSMR 600 DGSGVFEETF HIDGVDHIKP RDVLFQRLMR DKLYEWLVFK VHEGAKGPRV LDDEGQGVIH 660 LAAALGYVWA MGPLVAAGIS PNFRDARGRT GLHWASYFGR EETVIALVKL GAAPGAVEDP 720 TTAFPRGQKA ADLASNRGHK GIAGYLAETD LTNQLSILTI KENDTSNIAT TIAADSAFES 780 VDSDSSNMTM DEQHYLKESL AVFRKSAQAA ASILAAFRAR SFCQRQLAKR SSDISEAVLD 840 LVADSLNKAH IRGHQVRKQY KKVVWSVGIV EKAILRWRRK GAGLRGFRIG QTVGNVAKDA 900 DKNDEYEFLS IGRRQKSEDV KKALDRVKSM VRNPVARDQY MRLIIKYQKL KIDDGGSSQS 960 QHVG

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MTNTRNSNYI RNAQLVGFEE ILREAEHRWL RPAEICEILR NYRKFELTPN PPVRPPGGSL  60
FLFNRKALRY FRKDGHRWRK KKDGKTVREA HEKLKAGSLD VLHCYYAHGE DNENFQRRSY  120
WMLDEQLEHI VLVHYREIKE GCRSCISHSP VVPVTLVGSS QNSSVPSSTK INSQISVVQT  180
SFTSSANKVG QNGQASEYED VNSETQASSH DQPISKSMLH NAPQLAHEAT GFSELLRSPL  240
ISSLSSSFPS QSPGTGLSTW TLIPNYSRNT INMHDGERHV EGSVEGSETD FNVQKLSNAR  300
LDVDCRIQDG VIFRDRLITN TYIQPVKGAS QTVNQVQKED GLDSFRTQCP DHADHPDATT  360
TILVEQKLQD DDTDNDESER VESGKLKKLD SFGRWMDKEI GGDCDNSLMA SDSGNYWSTL  420
DAQNEDKEVS SLHHMQLDQG NSLGPSLSQE QLFSIHDFSP DWAYTGVKTK VLIAGTFLGS  480
KKLSSETKWG CMFGEIEVSA EVLAENVIRC QTPLHSPGRV PFYVTCSNRL ACSEVREFEY  540
LETPTKFLRP VGIKISAEDE IRLQMRLLKL VDLGADNKQW KCSVSECEKC KLKGTMYSMR  600
DGSGVFEETF HIDGVDHIKP RDVLFQRLMR DKLYEWLVFK VHEGAKGPRV LDDEGQGVIH  660
LAAALGYVWA MGPLVAAGIS PNFRDARGRT GLHWASYFGR EETVIALVKL GAAPGAVEDP  720
TTAFPRGQKA ADLASNRGHK GIAGYLAETD LTNQLSILTI KENDTSNIAT TIAADSAFES  780
VDSDSSNMTM DEQHYLKESL AVFRKSAQAA ASILAAFRAR SFCQRQLAKR SSDISEAVLD  840
LVADSLNKAH IRGHQVRKQY KKVVWSVGIV EKAILRWRRK GAGLRGFRIG QTVGNVAKDA  900
DKNDEYEFLS IGRRQKSEDV KKALDRVKSM VRNPVARDQY MRLIIKYQKL KIDDGGSSQS  960
QHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-128	CAMTA family protein