PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027330576.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 449aa MW: 50317.5 Da PI: 7.391

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027330576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE++++++a k++G W++I +++g ++t+ q++s+ qk+ XP_027330576.1 60 RERWTDEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 104 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MPIQGQNAVT RPRGGLPVGN GVSLNSGVHS VAHIPLNDQF SCGNDYSLKV RKPYTITKQR 60 ERWTDEEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH AQKFFSKILR EPSGNNTTTL 120 EESIEIPPPR PKRKPIHPYP RKLVEILKKE ISKSEQLLRS NSLKSSDFGQ ENNSPKSVLS 180 TVVSDTLGSS NSDTPTRSLS PVSSISGVHP SNFPLAETKT LFEEDGSPTQ DGLNASFAHD 240 DQPLVKLELF HKESVSTKHD TTEESCGRTL KLFGTTLLVT ETCKPTMEAC KPIPAVCLMQ 300 LQIGCSDIAE GHATIVPWWT LSHNKPFMKD SEAKQHLYSN IGEFENEEVL KEGSWTGSNT 360 SSINDGDNNE NSDDQAKSLV HCFSKGEEKL DPLGHTRPSE TSSIFEQRVR TKTCGKGFVP 420 YKRCMAEREM QFPPTNYEER EEQRIRLSL

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MPIQGQNAVT RPRGGLPVGN GVSLNSGVHS VAHIPLNDQF SCGNDYSLKV RKPYTITKQR  60
ERWTDEEHKK FLEALKLYGR AWRRIEEHVG TKTAVQIRSH AQKFFSKILR EPSGNNTTTL  120
EESIEIPPPR PKRKPIHPYP RKLVEILKKE ISKSEQLLRS NSLKSSDFGQ ENNSPKSVLS  180
TVVSDTLGSS NSDTPTRSLS PVSSISGVHP SNFPLAETKT LFEEDGSPTQ DGLNASFAHD  240
DQPLVKLELF HKESVSTKHD TTEESCGRTL KLFGTTLLVT ETCKPTMEAC KPIPAVCLMQ  300
LQIGCSDIAE GHATIVPWWT LSHNKPFMKD SEAKQHLYSN IGEFENEEVL KEGSWTGSNT  360
SSINDGDNNE NSDDQAKSLV HCFSKGEEKL DPLGHTRPSE TSSIFEQRVR TKTCGKGFVP  420
YKRCMAEREM QFPPTNYEER EEQRIRLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-54	MYB_related family protein