PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027330383.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 542aa    MW: 60360 Da    PI: 6.0597
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027330383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS406.62.4e-1241725422374
            GRAS   2 velLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +e+L  cA+avs++d   a+  + + l +++s  gdp+qRl ay++e+L+arl +s++ +yk+l++++ +   s e +++++++++++P+ kf++
  XP_027330383.1 172 KEVLKLCAQAVSDDDIPTARGWMDNvLGKMVSVGGDPIQRLGAYLLEGLRARLESSGNMIYKSLKCEQPT---SNELMSYMSILYQICPYWKFAY 263
                     678899***************997626888***************************************9...89999999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                       aN  I ea+++e+r+HiiDf+i qG QW  L+q La+Rp+gppslR+Tgv++++s+  +   le +gerL++fA+++gvpfef+  +a +  +
  XP_027330383.1 264 RSANAVIEEAMASETRIHIIDFQIAQGSQWHLLIQDLANRPGGPPSLRVTGVDDAQSFhaRGGGLEIVGERLSNFAKSCGVPFEFHS-AAMSGCE 357
                     ******************************************************9999889999***********************.6667777 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +   + ++++gEalaVn+ + lh+++desvs+e++rd++L+lvkslsP+vv++veqe+++n+++F++rf+e+l+yy+a+f+s+++  +r++++ri
  XP_027330383.1 358 VVRGNVEIRRGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPRVVTIVEQESNTNTSPFFHRFVETLDYYAAMFESIDVASSRDDKKRI 452
                     7799******************************************************************************************* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + E+++++r+ivn++aceg er+erhe ++kWr+rl++aGFk+ pls++++   + ll+ ++++ yr+++++g+l+lgW++rp+ + SaWr
  XP_027330383.1 453 SAEQHCVARDIVNMIACEGVERVERHELFGKWRSRLSMAGFKQSPLSSSVMGATQNLLKDFNQN-YRLKHRDGALYLGWMNRPMATSSAWR 542
                     **************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MQTSQKHPNS AGVHFYHQPV QGMYQILQSN LCRDSSSQDT SLSFETCKEQ YYTLESCPAS  60
TGFMDCDSPS YASVSSNRTP VSPQGSQSCY SDPHPLSDNT YGSPISGLSS VDDGNELKHK  120
LKELEISLLG PDESDIVDSC GCCINSGLHG APKLAEYNWD QMAEKIPQLD LKEVLKLCAQ  180
AVSDDDIPTA RGWMDNVLGK MVSVGGDPIQ RLGAYLLEGL RARLESSGNM IYKSLKCEQP  240
TSNELMSYMS ILYQICPYWK FAYRSANAVI EEAMASETRI HIIDFQIAQG SQWHLLIQDL  300
ANRPGGPPSL RVTGVDDAQS FHARGGGLEI VGERLSNFAK SCGVPFEFHS AAMSGCEVVR  360
GNVEIRRGEA LAVNFPYVLH HMPDESVSTE NHRDRLLRLV KSLSPRVVTI VEQESNTNTS  420
PFFHRFVETL DYYAAMFESI DVASSRDDKK RISAEQHCVA RDIVNMIACE GVERVERHEL  480
FGKWRSRLSM AGFKQSPLSS SVMGATQNLL KDFNQNYRLK HRDGALYLGW MNRPMATSSA  540
WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein