PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027330302.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 841aa MW: 93112.1 Da PI: 7.6182

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027330302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	48.9	1.7e-15	9	40	47	78
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 +rfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_027330302.1 9 TRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 40 7****************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence
MPRITTVGTR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP DVTVVDGGSL NDERGSSYLL 60 MSLLRILTNM HSNGSDHTRN QDILSHLLRN LGSLAGTING RSLASLLEES KGLLNAGMPG 120 ASHDKPNLNS NGPEASRPSG SSIKSDTGFI AQDPPMSVAQ CETMPAYGVT QKCIPSGDGG 180 VGNLELPSGL LPSSVSQSMD NLPSHLTAAE PETTVGRDRL NDIDLNNAYS DIQNTVENPK 240 KPYPHVASEM GSIDHPSWLQ CNSLKYSPPQ TGTNAESTST RSPSSSSGEA QSRTGRIVFK 300 LFGKDPNDFP LILRSQILNW LSHSPTEIES YIRPGCIILT IYLRLEKSAW EELCCNLGSN 360 LRKLLAGSND SFWKTGWIYA RVQHSVAFLN NGQVILDVPL RFKSPQDCKI SYIKPLAVPK 420 SSCAQFIVKG FNLFQSSTRL FCALEGKYLV HHSCLDLIDG ADLATQYLSF SCQIPNVTGR 480 GFIEVEDHDL SSCSFPFIVA EQDVCSEICK LENVVEAAET TDDIKIKNQQ MEEKTRALDF 540 LQEMGWLLHR SHVKVRLGSM VPTHDPFQFK RFMRLVDFSM DHSWCAVMKK LLDIIFEGGV 600 DTGEHASIDL ALLDMGLLHR AVKRNCRPMV ELLLRLTSYG ADSEVNQVDK ANDKFLFRPD 660 TVGLAGLTPL HVAASMNGTE NVLDALTDDP GMLGIEAWKS AQDNRGLTPN DYACLRGYYS 720 YIQLVQKKIN KQGERQHVVH ILSTVVDSNT KQKSDGHRTC KVSSLQTEKI ETAATARQCG 780 LCQHKLAYGG MRTTLVYRPA MLSMVTIAAV CVCVALLFKS SPRVYYVFQP FNWESLKYGT 840 I

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence

MPRITTVGTR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP DVTVVDGGSL NDERGSSYLL  60
MSLLRILTNM HSNGSDHTRN QDILSHLLRN LGSLAGTING RSLASLLEES KGLLNAGMPG  120
ASHDKPNLNS NGPEASRPSG SSIKSDTGFI AQDPPMSVAQ CETMPAYGVT QKCIPSGDGG  180
VGNLELPSGL LPSSVSQSMD NLPSHLTAAE PETTVGRDRL NDIDLNNAYS DIQNTVENPK  240
KPYPHVASEM GSIDHPSWLQ CNSLKYSPPQ TGTNAESTST RSPSSSSGEA QSRTGRIVFK  300
LFGKDPNDFP LILRSQILNW LSHSPTEIES YIRPGCIILT IYLRLEKSAW EELCCNLGSN  360
LRKLLAGSND SFWKTGWIYA RVQHSVAFLN NGQVILDVPL RFKSPQDCKI SYIKPLAVPK  420
SSCAQFIVKG FNLFQSSTRL FCALEGKYLV HHSCLDLIDG ADLATQYLSF SCQIPNVTGR  480
GFIEVEDHDL SSCSFPFIVA EQDVCSEICK LENVVEAAET TDDIKIKNQQ MEEKTRALDF  540
LQEMGWLLHR SHVKVRLGSM VPTHDPFQFK RFMRLVDFSM DHSWCAVMKK LLDIIFEGGV  600
DTGEHASIDL ALLDMGLLHR AVKRNCRPMV ELLLRLTSYG ADSEVNQVDK ANDKFLFRPD  660
TVGLAGLTPL HVAASMNGTE NVLDALTDDP GMLGIEAWKS AQDNRGLTPN DYACLRGYYS  720
YIQLVQKKIN KQGERQHVVH ILSTVVDSNT KQKSDGHRTC KVSSLQTEKI ETAATARQCG  780
LCQHKLAYGG MRTTLVYRPA MLSMVTIAAV CVCVALLFKS SPRVYYVFQP FNWESLKYGT  840
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	39	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein