PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027330300.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 1028aa MW: 113990 Da PI: 7.6708

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027330300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.5	2.5e-40	150	227	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adls+ak+yhrrhkvC+vhska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_027330300.1 150 VCQVQDCRADLSNAKDYHRRHKVCDVHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 227 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1028 aa Download sequence
MEAEFGGKNQ YLYMKAVGNG KRSLEWDLHD WNWDGDLFTA QPLNSVPSDC RSRQFFPPHP 60 ETPAKNTNTS NNLSSSIFSS GEGKRELEKR RRGVVGEVAR EELNDEGGSL NLNLGGQVYP 120 VMVEGEEKSG KKTKVIESTA PTTTTSNRAV CQVQDCRADL SNAKDYHRRH KVCDVHSKAT 180 KALVGNVMQR FCQQCSRFHV LQEFDEGKRS CRRRLAGHNK RRRKTHPDVT VVDGGSLNDE 240 RGSSYLLMSL LRILTNMHSN GSDHTRNQDI LSHLLRNLGS LAGTINGRSL ASLLEESKGL 300 LNAGMPGASH DKPNLNSNGP EASRPSGSSI KSDTGFIAQD PPMSVAQCET MPAYGVTQKC 360 IPSGDGGVGN LELPSGLLPS SVSQSMDNLP SHLTAAEPET TVGRDRLNDI DLNNAYSDIQ 420 NTVENPKKPY PHVASEMGSI DHPSWLQCNS LKYSPPQTGT NAESTSTRSP SSSSGEAQSR 480 TGRIVFKLFG KDPNDFPLIL RSQILNWLSH SPTEIESYIR PGCIILTIYL RLEKSAWEEL 540 CCNLGSNLRK LLAGSNDSFW KTGWIYARVQ HSVAFLNNGQ VILDVPLRFK SPQDCKISYI 600 KPLAVPKSSC AQFIVKGFNL FQSSTRLFCA LEGKYLVHHS CLDLIDGADL ATQYLSFSCQ 660 IPNVTGRGFI EVEDHDLSSC SFPFIVAEQD VCSEICKLEN VVEAAETTDD IKIKNQQMEE 720 KTRALDFLQE MGWLLHRSHV KVRLGSMVPT HDPFQFKRFM RLVDFSMDHS WCAVMKKLLD 780 IIFEGGVDTG EHASIDLALL DMGLLHRAVK RNCRPMVELL LRLTSYGADS EVNQVDKAND 840 KFLFRPDTVG LAGLTPLHVA ASMNGTENVL DALTDDPGML GIEAWKSAQD NRGLTPNDYA 900 CLRGYYSYIQ LVQKKINKQG ERQHVVHILS TVVDSNTKQK SDGHRTCKVS SLQTEKIETA 960 ATARQCGLCQ HKLAYGGMRT TLVYRPAMLS MVTIAAVCVC VALLFKSSPR VYYVFQPFNW 1020 ESLKYGTI

Sequence ? help Back to Top

Protein Sequence Length: 1028 aa Download sequence

MEAEFGGKNQ YLYMKAVGNG KRSLEWDLHD WNWDGDLFTA QPLNSVPSDC RSRQFFPPHP  60
ETPAKNTNTS NNLSSSIFSS GEGKRELEKR RRGVVGEVAR EELNDEGGSL NLNLGGQVYP  120
VMVEGEEKSG KKTKVIESTA PTTTTSNRAV CQVQDCRADL SNAKDYHRRH KVCDVHSKAT  180
KALVGNVMQR FCQQCSRFHV LQEFDEGKRS CRRRLAGHNK RRRKTHPDVT VVDGGSLNDE  240
RGSSYLLMSL LRILTNMHSN GSDHTRNQDI LSHLLRNLGS LAGTINGRSL ASLLEESKGL  300
LNAGMPGASH DKPNLNSNGP EASRPSGSSI KSDTGFIAQD PPMSVAQCET MPAYGVTQKC  360
IPSGDGGVGN LELPSGLLPS SVSQSMDNLP SHLTAAEPET TVGRDRLNDI DLNNAYSDIQ  420
NTVENPKKPY PHVASEMGSI DHPSWLQCNS LKYSPPQTGT NAESTSTRSP SSSSGEAQSR  480
TGRIVFKLFG KDPNDFPLIL RSQILNWLSH SPTEIESYIR PGCIILTIYL RLEKSAWEEL  540
CCNLGSNLRK LLAGSNDSFW KTGWIYARVQ HSVAFLNNGQ VILDVPLRFK SPQDCKISYI  600
KPLAVPKSSC AQFIVKGFNL FQSSTRLFCA LEGKYLVHHS CLDLIDGADL ATQYLSFSCQ  660
IPNVTGRGFI EVEDHDLSSC SFPFIVAEQD VCSEICKLEN VVEAAETTDD IKIKNQQMEE  720
KTRALDFLQE MGWLLHRSHV KVRLGSMVPT HDPFQFKRFM RLVDFSMDHS WCAVMKKLLD  780
IIFEGGVDTG EHASIDLALL DMGLLHRAVK RNCRPMVELL LRLTSYGADS EVNQVDKAND  840
KFLFRPDTVG LAGLTPLHVA ASMNGTENVL DALTDDPGML GIEAWKSAQD NRGLTPNDYA  900
CLRGYYSYIQ LVQKKINKQG ERQHVVHILS TVVDSNTKQK SDGHRTCKVS SLQTEKIETA  960
ATARQCGLCQ HKLAYGGMRT TLVYRPAMLS MVTIAAVCVC VALLFKSSPR VYYVFQPFNW  1020
ESLKYGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	226	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein