PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027330033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 316aa MW: 36155.1 Da PI: 4.9847 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 26.6 | 1.5e-08 | 26 | 95 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W+ e l L++ + +e + + + + ++W +++++++ + r+ qC+ kw l +y + +e+ ++ XP_027330033.1 26 WSITESLILVNEVAAVEADCSITLSSYQRWNIIADNCAALDVPRNLAQCRRKWHALLSDYDRFRETTRRD 95 9999999*********************************************************999874 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MRQNDDGRND VVSGTRRTRS QAAPDWSITE SLILVNEVAA VEADCSITLS SYQRWNIIAD 60 NCAALDVPRN LAQCRRKWHA LLSDYDRFRE TTRRDNKFRL PTNFDAELFR AIERVVKSRE 120 ERGEVDPESD TEAGNEARDA TVEIGGCKRK RQRSRSERHR VQKLNKCFEQ EPEESHDEGN 180 ENNSDEEFLK DFLESKPKMK CTAEKLLKHP LISPKNLGEV ELHENHNIEG SKLIGVEKLT 240 ISREENEETM TLKLQELAEE IQAIATESAA DYKGAGSQNV EDYHTEFTRC QGDKLIASLG 300 DFSNTLKQLC DLLQRV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 153 | KRKRQR |
2 | 149 | 155 | RKRQRSR |
3 | 150 | 155 | KRQRSR |
4 | 151 | 160 | RQRSRSERHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 6e-40 | Trihelix family protein |